Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AP001596.2-201ENST00000608410 312 ntBASIC1.34□□□□□ -2.19
CMC4P56277 AC009318.2-201ENST00000610917 651 ntBASIC1.34□□□□□ -2.19
CMC4P56277 RMST_6.1-201ENST00000611980 203 ntBASIC1.34□□□□□ -2.19
CMC4P56277 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
CMC4P56277 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.2
CMC4P56277 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
CMC4P56277 AP000560.1-201ENST00000624150 1937 ntBASIC1.33□□□□□ -2.2
CMC4P56277 Y_RNA.99-201ENST00000363138 105 ntBASIC1.33□□□□□ -2.2
CMC4P56277 Y_RNA.480-201ENST00000384364 102 ntBASIC1.33□□□□□ -2.2
CMC4P56277 RNU6-606P-201ENST00000384721 111 ntBASIC1.33□□□□□ -2.2
CMC4P56277 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.33□□□□□ -2.2
CMC4P56277 MIR1294-201ENST00000408503 142 ntBASIC1.33□□□□□ -2.2
CMC4P56277 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CMC4P56277 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.33□□□□□ -2.2
CMC4P56277 AC133104.1-201ENST00000429100 218 ntBASIC1.33□□□□□ -2.2
CMC4P56277 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.33□□□□□ -2.2
CMC4P56277 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.33□□□□□ -2.2
CMC4P56277 FDX1P2-201ENST00000450769 375 ntBASIC1.33□□□□□ -2.2
CMC4P56277 SNRPGP9-201ENST00000456025 225 ntBASIC1.33□□□□□ -2.2
CMC4P56277 PMCHL2-203ENST00000457791 237 ntBASIC1.33□□□□□ -2.2
CMC4P56277 RNU6-333P-201ENST00000459117 107 ntBASIC1.33□□□□□ -2.2
CMC4P56277 RPL30P12-201ENST00000474666 353 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.33□□□□□ -2.2
CMC4P56277 RNA5SP503-201ENST00000517047 117 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.33□□□□□ -2.2
CMC4P56277 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.33□□□□□ -2.2
CMC4P56277 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.33□□□□□ -2.2
CMC4P56277 AC022254.1-201ENST00000567857 235 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC109446.2-201ENST00000567872 497 ntBASIC1.33□□□□□ -2.2
CMC4P56277 DEFB122-202ENST00000569013 197 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC137800.2-201ENST00000574375 120 ntBASIC1.33□□□□□ -2.2
CMC4P56277 MIR4419B-201ENST00000577260 68 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC008752.3-201ENST00000588113 712 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.33□□□□□ -2.2
CMC4P56277 BNIP3P16-201ENST00000589779 534 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.33□□□□□ -2.2
CMC4P56277 AC109347.2-201ENST00000610220 349 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC005296.1-201ENST00000616145 209 ntBASIC1.33□□□□□ -2.2
CMC4P56277 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CMC4P56277 AC091304.6-201ENST00000619761 202 ntBASIC1.33□□□□□ -2.2
CMC4P56277 AC022418.1-201ENST00000624118 445 ntBASIC1.33□□□□□ -2.2
CMC4P56277 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CMC4P56277 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.33□□□□□ -2.2
CMC4P56277 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CMC4P56277 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.32□□□□□ -2.2
CMC4P56277 RNA5SP276-201ENST00000362580 94 ntBASIC1.32□□□□□ -2.2
CMC4P56277 RNU6-1164P-201ENST00000364428 107 ntBASIC1.32□□□□□ -2.2
CMC4P56277 RNU6-1029P-201ENST00000384109 107 ntBASIC1.32□□□□□ -2.2
CMC4P56277 MIR1-2-201ENST00000384961 85 ntBASIC1.32□□□□□ -2.2
CMC4P56277 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CMC4P56277 RPS29P13-201ENST00000402041 169 ntBASIC1.32□□□□□ -2.2
CMC4P56277 RNU2-40P-201ENST00000410833 196 ntBASIC1.32□□□□□ -2.2
CMC4P56277 HMGB3P2-201ENST00000411913 584 ntBASIC1.32□□□□□ -2.2
CMC4P56277 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.32□□□□□ -2.2
CMC4P56277 UBE2V1P4-201ENST00000425374 344 ntBASIC1.32□□□□□ -2.2
CMC4P56277 AC092447.3-201ENST00000426027 686 ntBASIC1.32□□□□□ -2.2
CMC4P56277 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.32□□□□□ -2.2
CMC4P56277 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.32□□□□□ -2.2
CMC4P56277 AL162395.1-201ENST00000457882 422 ntBASIC1.32□□□□□ -2.2
CMC4P56277 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.32□□□□□ -2.2
CMC4P56277 MTCO2P6-201ENST00000463134 685 ntBASIC1.32□□□□□ -2.2
CMC4P56277 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.32□□□□□ -2.2
CMC4P56277 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.32□□□□□ -2.2
CMC4P56277 AC116337.1-201ENST00000509680 687 ntBASIC1.32□□□□□ -2.2
CMC4P56277 RNU5F-2P-201ENST00000516066 82 ntBASIC1.32□□□□□ -2.2
CMC4P56277 SNORA25.15-201ENST00000516487 89 ntBASIC1.32□□□□□ -2.2
CMC4P56277 RNU6-1178P-201ENST00000516674 107 ntBASIC1.32□□□□□ -2.2
CMC4P56277 RNU6-548P-201ENST00000517083 115 ntBASIC1.32□□□□□ -2.2
CMC4P56277 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CMC4P56277 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.32□□□□□ -2.2
CMC4P56277 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.32□□□□□ -2.2
CMC4P56277 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.32□□□□□ -2.2
CMC4P56277 MIR4703-201ENST00000577728 79 ntBASIC1.32□□□□□ -2.2
CMC4P56277 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.32□□□□□ -2.2
CMC4P56277 AL356157.2-201ENST00000605122 111 ntBASIC1.32□□□□□ -2.2
CMC4P56277 AC087683.2-201ENST00000611384 326 ntBASIC1.32□□□□□ -2.2
CMC4P56277 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
CMC4P56277 U1.36-201ENST00000620684 176 ntBASIC1.32□□□□□ -2.2
CMC4P56277 AC009161.2-201ENST00000624626 138 ntBASIC1.32□□□□□ -2.2
CMC4P56277 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CMC4P56277 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CMC4P56277 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.31□□□□□ -2.2
CMC4P56277 AL356292.1-201ENST00000283110 373 ntBASIC1.31□□□□□ -2.2
CMC4P56277 snoU2_19.1-201ENST00000362361 80 ntBASIC1.31□□□□□ -2.2
CMC4P56277 RNU1-58P-201ENST00000362413 163 ntBASIC1.31□□□□□ -2.2
CMC4P56277 RNU6-527P-201ENST00000363425 104 ntBASIC1.31□□□□□ -2.2
CMC4P56277 SNORD32B-201ENST00000364460 84 ntBASIC1.31□□□□□ -2.2
CMC4P56277 RNU6-434P-201ENST00000384376 107 ntBASIC1.31□□□□□ -2.2
CMC4P56277 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CMC4P56277 Y_RNA.597-201ENST00000410463 100 ntBASIC1.31□□□□□ -2.2
CMC4P56277 RNU6-1245P-201ENST00000411130 106 ntBASIC1.31□□□□□ -2.2
CMC4P56277 SNORD56-201ENST00000413522 71 ntBASIC1.31□□□□□ -2.2
CMC4P56277 HMGN2P19-201ENST00000425149 265 ntBASIC1.31□□□□□ -2.2
CMC4P56277 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.31□□□□□ -2.2
CMC4P56277 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.31□□□□□ -2.2
CMC4P56277 AC243964.1-201ENST00000441814 261 ntBASIC1.31□□□□□ -2.2
CMC4P56277 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.31□□□□□ -2.2
CMC4P56277 MTND2P4-201ENST00000445034 1004 ntBASIC1.31□□□□□ -2.2
CMC4P56277 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.31□□□□□ -2.2
CMC4P56277 RPL23AP6-201ENST00000446637 472 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms