Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.53□□□□□ -1.84
GFRA1P56159 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GFRA1P56159 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.53□□□□□ -1.84
GFRA1P56159 Y_RNA.462-201ENST00000384268 102 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 MIR329-1-201ENST00000385028 80 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 MIR134-201ENST00000385258 73 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 MIR320B2-201ENST00000408479 138 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.53□□□□□ -1.84
GFRA1P56159 AC112220.1-201ENST00000434628 355 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 AC005002.2-201ENST00000438228 269 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.53□□□□□ -1.84
GFRA1P56159 CYCSP30-201ENST00000546447 172 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.53□□□□□ -1.84
GFRA1P56159 MIR3923-201ENST00000579521 83 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 AC006130.2-201ENST00000586202 326 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 AC010999.1-201ENST00000611856 324 ntBASIC3.53□□□□□ -1.84
GFRA1P56159 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GFRA1P56159 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
GFRA1P56159 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
GFRA1P56159 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
GFRA1P56159 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GFRA1P56159 RNU4-90P-201ENST00000362773 141 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
GFRA1P56159 RNU6-1145P-201ENST00000384246 107 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 MIR199A2-201ENST00000385289 110 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 MT-TR-201ENST00000387439 65 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
GFRA1P56159 U3.26-201ENST00000391236 204 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 Y_RNA.595-201ENST00000410403 105 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 RNU5A-5P-201ENST00000411054 116 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.52□□□□□ -1.85
GFRA1P56159 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 snoU13.14-201ENST00000459372 104 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 AP001324.2-201ENST00000461163 319 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 RN7SL323P-201ENST00000494712 295 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 RPL31P61-201ENST00000496160 376 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.52□□□□□ -1.85
GFRA1P56159 RNU6-711P-201ENST00000517255 106 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.52□□□□□ -1.85
GFRA1P56159 AL356575.1-201ENST00000603008 283 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 BRDTP1-201ENST00000605735 677 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 MIR4727-201ENST00000622232 55 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GFRA1P56159 ZNF204P-201ENST00000416749 2397 ntBASIC3.52□□□□□ -1.85
GFRA1P56159 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
GFRA1P56159 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
GFRA1P56159 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GFRA1P56159 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
GFRA1P56159 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.51□□□□□ -1.85
GFRA1P56159 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
GFRA1P56159 Y_RNA.20-201ENST00000362479 113 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 SNORD27-201ENST00000363981 72 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 Y_RNA.352-201ENST00000365439 102 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 Y_RNA.541-201ENST00000384640 113 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 CYCSP19-201ENST00000411715 316 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 AL365496.1-201ENST00000426885 215 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.51□□□□□ -1.85
GFRA1P56159 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.51□□□□□ -1.85
GFRA1P56159 AC007215.1-201ENST00000464893 276 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 RNU6-496P-201ENST00000516145 99 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 SNORA25.14-201ENST00000516481 132 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.51□□□□□ -1.85
GFRA1P56159 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.51□□□□□ -1.85
GFRA1P56159 AL137843.1-201ENST00000605078 385 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 SNORD113-5-201ENST00000607261 78 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 AC011373.1-201ENST00000607270 237 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.51□□□□□ -1.85
GFRA1P56159 uc_338.14-201ENST00000613162 166 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 AC005520.5-201ENST00000613926 164 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.51□□□□□ -1.85
GFRA1P56159 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
GFRA1P56159 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GFRA1P56159 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
GFRA1P56159 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.51□□□□□ -1.85
GFRA1P56159 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
GFRA1P56159 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GFRA1P56159 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
GFRA1P56159 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GFRA1P56159 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.5□□□□□ -1.85
GFRA1P56159 MAPK10-253ENST00000641010 4072 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA1P56159 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
GFRA1P56159 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA1P56159 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
GFRA1P56159 BX322639.1-202ENST00000423987 2213 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GFRA1P56159 RNU6-529P-201ENST00000363383 104 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 RNU6-290P-201ENST00000365212 101 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 SNORD6-201ENST00000365444 73 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 RNU6-245P-201ENST00000384020 107 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 U1.1-201ENST00000384101 164 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 RNU6-1026P-201ENST00000384465 108 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 RNU6-21P-201ENST00000384710 107 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 MIR30B-201ENST00000384850 88 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 RNA5SP354-201ENST00000391247 136 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AL033519.2-201ENST00000403958 392 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 SNORA3.3-201ENST00000408712 125 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 RN7SKP202-201ENST00000410439 330 ntBASIC3.5□□□□□ -1.85
GFRA1P56159 AC009310.1-201ENST00000414414 451 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms