Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NR1H2P55055 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.82□□□□□ -1.96
NR1H2P55055 RPL9P7-201ENST00000330965 580 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 RNU6-105P-201ENST00000363909 104 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 RNU6-827P-201ENST00000365553 106 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NR1H2P55055 SNORD116-11-201ENST00000383882 92 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 Y_RNA.510-201ENST00000384511 114 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 AL356432.1-201ENST00000405809 419 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 EIF4EP4-201ENST00000424916 578 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.82□□□□□ -1.96
NR1H2P55055 S100A11P2-201ENST00000467589 312 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 RN7SL20P-201ENST00000488827 297 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 AC008526.1-201ENST00000509149 338 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.82□□□□□ -1.96
NR1H2P55055 AC091826.1-201ENST00000514065 313 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 Y_RNA.682-201ENST00000516457 100 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 RNU6-566P-201ENST00000516790 107 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.82□□□□□ -1.96
NR1H2P55055 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.82□□□□□ -1.96
NR1H2P55055 AC138761.3-201ENST00000579993 334 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 AC100830.2-201ENST00000581636 240 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 AL356157.2-201ENST00000605122 111 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 uc_338.25-201ENST00000613756 156 ntBASIC2.82□□□□□ -1.96
NR1H2P55055 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.82□□□□□ -1.96
NR1H2P55055 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.82□□□□□ -1.96
NR1H2P55055 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
NR1H2P55055 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NR1H2P55055 RNU6-562P-201ENST00000362731 107 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 Y_RNA.135-201ENST00000363439 95 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 Y_RNA.184-201ENST00000363884 108 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 SNORA80A-201ENST00000363922 136 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 RNU6-1222P-201ENST00000384615 107 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 AL590632.1-201ENST00000424289 371 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 RPS15AP10-201ENST00000432472 382 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 HMGB1P18-201ENST00000438801 619 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.81□□□□□ -1.96
NR1H2P55055 CKS1BP2-201ENST00000497342 240 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 RNA5SP454-201ENST00000517231 127 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 AC115990.1-201ENST00000526957 301 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.81□□□□□ -1.96
NR1H2P55055 AC103996.1-201ENST00000555468 102 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.81□□□□□ -1.96
NR1H2P55055 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NR1H2P55055 AC243960.4-201ENST00000600532 288 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 AC008121.3-201ENST00000618726 433 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 TPTEP1-208ENST00000636884 213 ntBASIC2.81□□□□□ -1.96
NR1H2P55055 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NR1H2P55055 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.8□□□□□ -1.96
NR1H2P55055 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NR1H2P55055 RNU6-428P-201ENST00000362942 107 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 SNORA38-201ENST00000363946 132 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NR1H2P55055 MIR186-201ENST00000384988 86 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NR1H2P55055 RPS29P13-201ENST00000402041 169 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 CYCSP48-201ENST00000417124 323 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AL117339.3-201ENST00000418733 162 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.8□□□□□ -1.96
NR1H2P55055 NUP35P1-201ENST00000422734 947 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 UBE2V1P4-201ENST00000425374 344 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AC007969.2-201ENST00000441891 191 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AC093019.1-201ENST00000443135 252 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 snoU13.14-201ENST00000459372 104 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AK3P2-201ENST00000507976 429 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AC096745.1-201ENST00000509945 370 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.8□□□□□ -1.96
NR1H2P55055 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.8□□□□□ -1.96
NR1H2P55055 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.8□□□□□ -1.96
NR1H2P55055 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
NR1H2P55055 MIR4790-201ENST00000577799 79 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.8□□□□□ -1.96
NR1H2P55055 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
NR1H2P55055 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.8□□□□□ -1.96
NR1H2P55055 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
NR1H2P55055 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H2P55055 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NR1H2P55055 RNU6-655P-201ENST00000362858 107 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 SNORA5B-201ENST00000363786 132 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H2P55055 RPL19P1-201ENST00000411635 428 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H2P55055 SNAP23P1-201ENST00000433229 246 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 SNRPEP8-201ENST00000442866 260 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H2P55055 AMD1P1-201ENST00000457220 922 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 AC073901.1-201ENST00000462471 408 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H2P55055 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H2P55055 RNU2-53P-201ENST00000516257 147 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 AP005639.2-201ENST00000527592 928 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H2P55055 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.79□□□□□ -1.96
NR1H2P55055 AC093732.2-201ENST00000607950 274 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms