Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.48□□□□□ -2.01
LIMK1P53667 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.48□□□□□ -2.01
LIMK1P53667 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.48□□□□□ -2.01
LIMK1P53667 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.48□□□□□ -2.01
LIMK1P53667 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LIMK1P53667 AC107222.1-201ENST00000510899 637 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 Y_RNA.655-201ENST00000515919 96 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 RNU6-1281P-201ENST00000516223 105 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 RNU6-1038P-201ENST00000516516 104 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 AC079598.5-201ENST00000547460 117 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 AC060766.3-201ENST00000591442 263 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 AF250324.2-201ENST00000608299 610 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 Z69720.2-201ENST00000624755 279 ntBASIC2.48□□□□□ -2.01
LIMK1P53667 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LIMK1P53667 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.48□□□□□ -2.01
LIMK1P53667 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LIMK1P53667 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
LIMK1P53667 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LIMK1P53667 RNU6-266P-201ENST00000364225 107 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 Y_RNA.399-201ENST00000383955 105 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 AL355497.1-201ENST00000406262 551 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.47□□□□□ -2.01
LIMK1P53667 RNU6-1140P-201ENST00000410517 106 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 RNU2-63P-201ENST00000410792 194 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 RNA5SP270-201ENST00000411361 118 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.47□□□□□ -2.01
LIMK1P53667 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.47□□□□□ -2.01
LIMK1P53667 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.47□□□□□ -2.01
LIMK1P53667 TPTE2P5-203ENST00000458118 728 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 MTCO3P38-201ENST00000468910 766 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 RPL23AP42-201ENST00000471152 471 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 AC132942.1-201ENST00000486753 483 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.47□□□□□ -2.01
LIMK1P53667 AC091435.1-201ENST00000505442 584 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.47□□□□□ -2.01
LIMK1P53667 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.47□□□□□ -2.01
LIMK1P53667 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.47□□□□□ -2.01
LIMK1P53667 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.47□□□□□ -2.01
LIMK1P53667 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.47□□□□□ -2.01
LIMK1P53667 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
LIMK1P53667 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LIMK1P53667 AC244517.12-201ENST00000623581 663 ntBASIC2.47□□□□□ -2.01
LIMK1P53667 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.46□□□□□ -2.02
LIMK1P53667 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
LIMK1P53667 HAUS6P2-201ENST00000433254 2404 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 Y_RNA.226-201ENST00000364337 114 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 Y_RNA.338-201ENST00000365320 114 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 DEFA7P-201ENST00000382676 285 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 RNU6-483P-201ENST00000384088 108 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LIMK1P53667 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMK1P53667 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.46□□□□□ -2.02
LIMK1P53667 AL031274.1-201ENST00000450334 232 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 RPL30P12-201ENST00000474666 353 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 RPL23AP45-201ENST00000476406 468 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 SRIP1-201ENST00000489235 288 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMK1P53667 AC234781.5-201ENST00000508429 271 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 SNORA31.23-201ENST00000517219 133 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LIMK1P53667 CYCSP26-201ENST00000534107 320 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 AC023050.3-201ENST00000541142 333 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 HMGB1P33-201ENST00000563485 527 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 AC073410.2-201ENST00000603240 332 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 AC104237.2-201ENST00000612456 443 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 AC024581.2-201ENST00000619986 252 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 AC097372.5-201ENST00000623665 376 ntBASIC2.46□□□□□ -2.02
LIMK1P53667 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
LIMK1P53667 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LIMK1P53667 Y_RNA.3-201ENST00000362331 103 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 RNU6-212P-201ENST00000362642 104 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LIMK1P53667 RNU6-780P-201ENST00000391030 104 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 RNA5SP390-201ENST00000410191 113 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LIMK1P53667 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.45□□□□□ -2.02
LIMK1P53667 SEPT14P3-201ENST00000439401 183 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.45□□□□□ -2.02
LIMK1P53667 AL732372.2-207ENST00000445840 183 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 SEPT14P2-201ENST00000453405 183 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC018437.1-201ENST00000492214 406 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC019235.1-201ENST00000503847 207 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC008526.1-201ENST00000509149 338 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.45□□□□□ -2.02
LIMK1P53667 AF213884.2-201ENST00000510417 903 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 SEPT14P4-201ENST00000513445 186 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 RNU6-720P-201ENST00000516363 108 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC109479.2-201ENST00000517842 174 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 FO082796.1-201ENST00000523795 183 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC118273.2-201ENST00000532092 465 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC016957.1-201ENST00000534895 309 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 PSMA3P-201ENST00000555485 635 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 MIR4635-201ENST00000583759 79 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC078899.2-201ENST00000595282 212 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AL162413.1-201ENST00000603198 110 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AL121917.1-203ENST00000605534 577 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 RNU6-85P-201ENST00000605989 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms