Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL359704.1-201ENST00000411586 781 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AC139712.2-201ENST00000424302 339 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AL627311.1-201ENST00000431514 115 ntBASIC0.71□□□□□ -2.3
NUP98P52948 EEF1E1P1-201ENST00000446998 430 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.71□□□□□ -2.3
NUP98P52948 MTND5P9-201ENST00000503854 1755 ntBASIC0.71□□□□□ -2.3
NUP98P52948 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP98P52948 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP98P52948 AL132657.2-201ENST00000564417 358 ntBASIC0.71□□□□□ -2.3
NUP98P52948 MTND5P33-201ENST00000571250 1450 ntBASIC0.71□□□□□ -2.3
NUP98P52948 MTATP6P25-201ENST00000574491 261 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AC098483.2-201ENST00000603158 454 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AC073410.2-201ENST00000603240 332 ntBASIC0.71□□□□□ -2.3
NUP98P52948 MZT1P2-201ENST00000604387 248 ntBASIC0.71□□□□□ -2.3
NUP98P52948 MIR8063-201ENST00000621930 81 ntBASIC0.71□□□□□ -2.3
NUP98P52948 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.71□□□□□ -2.3
NUP98P52948 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.71□□□□□ -2.3
NUP98P52948 RNU6-487P-201ENST00000365430 104 ntBASIC0.71□□□□□ -2.3
NUP98P52948 RNU6-468P-201ENST00000384003 109 ntBASIC0.71□□□□□ -2.3
NUP98P52948 BTF3L4P1-201ENST00000413813 468 ntBASIC0.71□□□□□ -2.3
NUP98P52948 RPL21P111-201ENST00000418453 477 ntBASIC0.71□□□□□ -2.3
NUP98P52948 EIF1P1-201ENST00000421436 341 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.71□□□□□ -2.3
NUP98P52948 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP98P52948 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.71□□□□□ -2.3
NUP98P52948 AC067942.3-201ENST00000512025 362 ntBASIC0.71□□□□□ -2.3
NUP98P52948 RNU6-1315P-201ENST00000517187 99 ntBASIC0.71□□□□□ -2.3
NUP98P52948 MTND1P36-201ENST00000522384 936 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AL136520.1-202ENST00000555494 763 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP98P52948 AC008945.2-201ENST00000606056 604 ntBASIC0.71□□□□□ -2.3
NUP98P52948 AC009033.1-201ENST00000624279 431 ntBASIC0.71□□□□□ -2.3
NUP98P52948 MIR924-201ENST00000638017 53 ntBASIC0.71□□□□□ -2.3
NUP98P52948 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
NUP98P52948 Y_RNA.258-201ENST00000364613 105 ntBASIC0.7□□□□□ -2.3
NUP98P52948 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
NUP98P52948 RNU6-1025P-201ENST00000410629 104 ntBASIC0.7□□□□□ -2.3
NUP98P52948 AL161935.2-201ENST00000414627 60 ntBASIC0.7□□□□□ -2.3
NUP98P52948 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.7□□□□□ -2.3
NUP98P52948 AC027119.1-201ENST00000440877 241 ntBASIC0.7□□□□□ -2.3
NUP98P52948 AL163195.1-201ENST00000496941 348 ntBASIC0.7□□□□□ -2.3
NUP98P52948 RNA5SP476-201ENST00000516613 103 ntBASIC0.7□□□□□ -2.3
NUP98P52948 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
NUP98P52948 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.7□□□□□ -2.3
NUP98P52948 MIR5094-201ENST00000578766 85 ntBASIC0.7□□□□□ -2.3
NUP98P52948 BNIP3P30-201ENST00000601184 574 ntBASIC0.7□□□□□ -2.3
NUP98P52948 AC093788.1-201ENST00000609356 927 ntBASIC0.7□□□□□ -2.3
NUP98P52948 RNU6-655P-201ENST00000362858 107 ntBASIC0.69□□□□□ -2.3
NUP98P52948 Y_RNA.311-201ENST00000365068 96 ntBASIC0.69□□□□□ -2.3
NUP98P52948 RNU1-36P-201ENST00000365130 165 ntBASIC0.69□□□□□ -2.3
NUP98P52948 MIR186-201ENST00000384988 86 ntBASIC0.69□□□□□ -2.3
NUP98P52948 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
NUP98P52948 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.69□□□□□ -2.3
NUP98P52948 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.69□□□□□ -2.3
NUP98P52948 DPPA3P3-201ENST00000603842 430 ntBASIC0.69□□□□□ -2.3
NUP98P52948 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.69□□□□□ -2.3
NUP98P52948 AC092656.1-203ENST00000624134 423 ntBASIC0.69□□□□□ -2.3
NUP98P52948 AL356094.1-201ENST00000624663 1212 ntBASIC0.69□□□□□ -2.3
NUP98P52948 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.69□□□□□ -2.3
NUP98P52948 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
NUP98P52948 RNU6-843P-201ENST00000384454 104 ntBASIC0.68□□□□□ -2.3
NUP98P52948 RNU6-1222P-201ENST00000384615 107 ntBASIC0.68□□□□□ -2.3
NUP98P52948 RPL23AP32-201ENST00000395315 459 ntBASIC0.68□□□□□ -2.3
NUP98P52948 MIR320C1-201ENST00000408566 88 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP98P52948 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.68□□□□□ -2.3
NUP98P52948 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP98P52948 AL365338.1-201ENST00000422282 858 ntBASIC0.68□□□□□ -2.3
NUP98P52948 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.68□□□□□ -2.3
NUP98P52948 PGBD4P5-201ENST00000445958 426 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AL606517.1-201ENST00000446914 387 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.68□□□□□ -2.3
NUP98P52948 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
NUP98P52948 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.68□□□□□ -2.3
NUP98P52948 DEFB130C-202ENST00000530001 230 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP98P52948 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP98P52948 AC087897.1-201ENST00000550134 156 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC112220.3-201ENST00000605502 502 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.68□□□□□ -2.3
NUP98P52948 AC012676.2-201ENST00000619258 186 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC027335.2-201ENST00000624030 375 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC022513.1-201ENST00000624512 117 ntBASIC0.68□□□□□ -2.3
NUP98P52948 MIR1248-201ENST00000629190 106 ntBASIC0.68□□□□□ -2.3
NUP98P52948 SNORA22-201ENST00000383907 134 ntBASIC0.68□□□□□ -2.3
NUP98P52948 SNORA29-201ENST00000384183 140 ntBASIC0.68□□□□□ -2.3
NUP98P52948 SNORA25-201ENST00000384384 134 ntBASIC0.68□□□□□ -2.3
NUP98P52948 SNORA22C-201ENST00000384614 134 ntBASIC0.68□□□□□ -2.3
NUP98P52948 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
NUP98P52948 MIR301A-201ENST00000385261 86 ntBASIC0.68□□□□□ -2.3
NUP98P52948 MTCO1P17-201ENST00000411522 491 ntBASIC0.68□□□□□ -2.3
NUP98P52948 C8orf59P1-201ENST00000429930 303 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC130509.1-201ENST00000464158 433 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC108078.1-201ENST00000508073 725 ntBASIC0.68□□□□□ -2.3
NUP98P52948 AC079140.3-201ENST00000511111 550 ntBASIC0.68□□□□□ -2.3
NUP98P52948 RNU7-40P-201ENST00000516397 64 ntBASIC0.68□□□□□ -2.3
NUP98P52948 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP98P52948 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP98P52948 AL355472.4-201ENST00000610233 626 ntBASIC0.68□□□□□ -2.3
NUP98P52948 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms