Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MTND5P5-201ENST00000503764 376 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 AC008413.1-201ENST00000511864 177 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.79□□□□□ -1.96
CLCN3P51790 RNU6-581P-201ENST00000516214 105 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 Y_RNA.687-201ENST00000516558 91 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNU6-566P-201ENST00000516790 107 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 Y_RNA.701-201ENST00000516812 110 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 ACA59.2-201ENST00000517061 156 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNA5SP454-201ENST00000517231 127 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 AP005639.2-201ENST00000527592 928 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCN3P51790 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.79□□□□□ -1.96
CLCN3P51790 CR383656.8-201ENST00000549046 145 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCN3P51790 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCN3P51790 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCN3P51790 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCN3P51790 AC020895.1-201ENST00000595362 272 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNU6-91P-201ENST00000607774 107 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 uc_338.14-201ENST00000613162 166 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 uc_338.15-201ENST00000615470 191 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 AC010378.1-201ENST00000619270 362 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 AC098657.3-201ENST00000620434 263 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 U4.3-201ENST00000621047 82 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLCN3P51790 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCN3P51790 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.78□□□□□ -1.96
CLCN3P51790 SNORD116-11-201ENST00000383882 92 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 RNU6-1013P-201ENST00000384180 107 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 Y_RNA.460-201ENST00000384255 102 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 MIR887-201ENST00000401258 79 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AL354751.2-201ENST00000415471 210 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCN3P51790 PGBD4P6-201ENST00000421501 610 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 SAR1AP4-201ENST00000429225 591 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCN3P51790 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.78□□□□□ -1.96
CLCN3P51790 RPL23AP58-201ENST00000440453 469 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 MTCYBP6-201ENST00000441810 138 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 GSTA11P-201ENST00000452866 669 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 Y_RNA.632-201ENST00000459189 102 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.78□□□□□ -1.96
CLCN3P51790 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCN3P51790 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.78□□□□□ -1.96
CLCN3P51790 HMGN1P13-201ENST00000505795 138 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCN3P51790 AC109479.2-201ENST00000517842 174 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCN3P51790 COPS8P3-201ENST00000526024 482 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCN3P51790 ANP32BP3-201ENST00000559213 706 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AC005668.1-201ENST00000571142 476 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AC010620.2-201ENST00000600135 313 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 AC002044.1-201ENST00000606707 158 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCN3P51790 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCN3P51790 AL160413.1-201ENST00000622780 310 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 MIR6733-201ENST00000635723 61 ntBASIC2.78□□□□□ -1.96
CLCN3P51790 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
CLCN3P51790 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLCN3P51790 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCN3P51790 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CLCN3P51790 Y_RNA.67-201ENST00000362870 100 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 RNU6-1252P-201ENST00000363054 104 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 RNU6-487P-201ENST00000365430 104 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 U8.9-201ENST00000365667 134 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 Y_RNA.387-201ENST00000383918 102 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 SNORD116-29-201ENST00000384516 83 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 RPL7P37-201ENST00000425095 738 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AC007677.1-201ENST00000445757 515 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 RNU7-152P-201ENST00000458982 64 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 SNORD19B-201ENST00000459623 84 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 MRPL42P6-201ENST00000486397 371 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AC008526.1-201ENST00000509149 338 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCN3P51790 RNU5F-8P-201ENST00000515941 111 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 Y_RNA.682-201ENST00000516457 100 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLCN3P51790 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.77□□□□□ -1.97
CLCN3P51790 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCN3P51790 AP000763.2-201ENST00000540641 163 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 IMMP1LP2-201ENST00000552954 492 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AC009163.5-201ENST00000575421 637 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AC008121.1-201ENST00000603244 268 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 APOOP1-201ENST00000604695 592 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AC016727.1-205ENST00000605437 569 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AL133255.1-201ENST00000606374 441 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AL627309.6-201ENST00000606857 840 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCN3P51790 AC007742.2-201ENST00000618226 398 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 MIR3529-201ENST00000637713 78 ntBASIC2.77□□□□□ -1.97
CLCN3P51790 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLCN3P51790 AC138915.1-201ENST00000565427 1685 ntBASIC2.76□□□□□ -1.97
CLCN3P51790 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CLCN3P51790 SNORA68.1-201ENST00000364537 132 ntBASIC2.76□□□□□ -1.97
CLCN3P51790 RNU6-128P-201ENST00000383976 107 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms