Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 RN7SKP272-201ENST00000516988 232 ntBASIC3.67□□□□□ -1.82
KCNC1P48547 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.67□□□□□ -1.82
KCNC1P48547 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.67□□□□□ -1.82
KCNC1P48547 AC053481.4-201ENST00000583164 216 ntBASIC3.67□□□□□ -1.82
KCNC1P48547 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNC1P48547 SNORD113-5-201ENST00000607261 78 ntBASIC3.67□□□□□ -1.82
KCNC1P48547 AL391261.4-201ENST00000616012 481 ntBASIC3.67□□□□□ -1.82
KCNC1P48547 AC099506.2-201ENST00000623074 221 ntBASIC3.67□□□□□ -1.82
KCNC1P48547 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KCNC1P48547 AC093908.1-201ENST00000623125 8092 ntBASIC3.67□□□□□ -1.82
KCNC1P48547 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
KCNC1P48547 TNPO1P3-201ENST00000436471 2662 ntBASIC3.67□□□□□ -1.82
KCNC1P48547 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KCNC1P48547 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.66□□□□□ -1.82
KCNC1P48547 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
KCNC1P48547 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
KCNC1P48547 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
KCNC1P48547 ZNF826P-207ENST00000622273 1910 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.66□□□□□ -1.82
KCNC1P48547 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
KCNC1P48547 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 RNU6-336P-201ENST00000364891 107 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 Y_RNA.569-201ENST00000384749 103 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 RNA5SP213-201ENST00000391031 106 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 SNORA3.3-201ENST00000408712 125 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.66□□□□□ -1.82
KCNC1P48547 AL627311.1-201ENST00000431514 115 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.66□□□□□ -1.82
KCNC1P48547 AP001324.2-201ENST00000461163 319 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 RN7SL132P-201ENST00000478131 296 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 RPL21P13-201ENST00000488305 481 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 AC139453.3-201ENST00000493276 369 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 RN7SL323P-201ENST00000494712 295 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 SNORA70.14-201ENST00000516205 110 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 Y_RNA.679-201ENST00000516416 91 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 ATP5F1P5-201ENST00000526403 760 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 AC008011.1-201ENST00000545989 227 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 CYCSP30-201ENST00000546447 172 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.66□□□□□ -1.82
KCNC1P48547 MIR4308-201ENST00000580634 81 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 AC002545.1-201ENST00000592511 181 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 RNU1-30P-201ENST00000606575 163 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 MIR6875-201ENST00000617506 72 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 AL161912.2-201ENST00000565707 3007 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
KCNC1P48547 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 AF117829.1-206ENST00000621883 3802 ntBASIC3.66□□□□□ -1.82
KCNC1P48547 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNC1P48547 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
KCNC1P48547 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KCNC1P48547 Y_RNA.82-201ENST00000363000 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.92-201ENST00000363043 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.235-201ENST00000364412 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 RNA5SP515-201ENST00000364570 118 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.306-201ENST00000365015 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.312-201ENST00000365089 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.322-201ENST00000365151 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.446-201ENST00000384178 104 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 RNU6-959P-201ENST00000384671 107 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 MIR23B-201ENST00000384832 97 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 MIR30B-201ENST00000384850 88 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 RNA5SP424-201ENST00000390988 115 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 RN7SKP53-201ENST00000411337 315 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.650-201ENST00000459002 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 AL049830.2-201ENST00000480072 201 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 AP001025.1-201ENST00000486139 332 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 RPL23AP75-201ENST00000491601 451 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 RNU6-377P-201ENST00000515965 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.777-201ENST00000516982 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 AC027288.2-201ENST00000553028 243 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KCNC1P48547 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.771-201ENST00000598668 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 RPL23AP88-201ENST00000605759 454 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 Y_RNA.789-201ENST00000622480 102 ntBASIC3.65□□□□□ -1.83
KCNC1P48547 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.65□□□□□ -1.83
KCNC1P48547 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNC1P48547 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KCNC1P48547 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KCNC1P48547 OTUD4P1-201ENST00000237841 3067 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCNC1P48547 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.64□□□□□ -1.83
KCNC1P48547 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNC1P48547 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCNC1P48547 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCNC1P48547 RNU6-283P-201ENST00000364788 107 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 RNU6-1130P-201ENST00000365434 107 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 RNU6-17P-201ENST00000384245 107 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 RNU6-166P-201ENST00000384371 107 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 RNU6-18P-201ENST00000384527 107 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KCNC1P48547 RNU5E-9P-201ENST00000411164 104 ntBASIC3.64□□□□□ -1.83
KCNC1P48547 BMS1P22-201ENST00000414726 313 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms