Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.83□□□□□ -2.28
RPL28P46779 AC108078.2-201ENST00000510750 236 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC005741.1-201ENST00000511094 432 ntBASIC0.83□□□□□ -2.28
RPL28P46779 MIR449C-201ENST00000516047 92 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RNU6-123P-201ENST00000516163 102 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RNA5SP337-201ENST00000517007 109 ntBASIC0.83□□□□□ -2.28
RPL28P46779 MTND2P7-201ENST00000521337 640 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC090821.2-201ENST00000523552 176 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC115990.1-201ENST00000526957 301 ntBASIC0.83□□□□□ -2.28
RPL28P46779 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.83□□□□□ -2.28
RPL28P46779 RAB11AP2-201ENST00000545905 639 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.83□□□□□ -2.28
RPL28P46779 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL28P46779 AC009977.1-201ENST00000586015 570 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AL645939.4-201ENST00000604495 135 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AL139286.2-201ENST00000606838 396 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AL078604.3-201ENST00000615580 211 ntBASIC0.83□□□□□ -2.28
RPL28P46779 MIR6715A-201ENST00000615929 79 ntBASIC0.83□□□□□ -2.28
RPL28P46779 RMST_4.1-201ENST00000616886 107 ntBASIC0.83□□□□□ -2.28
RPL28P46779 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.83□□□□□ -2.28
RPL28P46779 AC103706.2-201ENST00000638080 240 ntBASIC0.83□□□□□ -2.28
RPL28P46779 SNORD56.2-201ENST00000363242 71 ntBASIC0.82□□□□□ -2.28
RPL28P46779 RNU6-157P-201ENST00000383957 107 ntBASIC0.82□□□□□ -2.28
RPL28P46779 RNU6-482P-201ENST00000391068 107 ntBASIC0.82□□□□□ -2.28
RPL28P46779 SNORA12-201ENST00000391162 147 ntBASIC0.82□□□□□ -2.28
RPL28P46779 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.82□□□□□ -2.28
RPL28P46779 MIR1285-1-201ENST00000408593 84 ntBASIC0.82□□□□□ -2.28
RPL28P46779 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL28P46779 AC114491.1-201ENST00000416095 246 ntBASIC0.82□□□□□ -2.28
RPL28P46779 RPL21P111-201ENST00000418453 477 ntBASIC0.82□□□□□ -2.28
RPL28P46779 MTCO2P21-201ENST00000419780 677 ntBASIC0.82□□□□□ -2.28
RPL28P46779 TOMM22P2-201ENST00000430735 237 ntBASIC0.82□□□□□ -2.28
RPL28P46779 AL135790.2-201ENST00000437701 267 ntBASIC0.82□□□□□ -2.28
RPL28P46779 RPS29P28-201ENST00000446439 141 ntBASIC0.82□□□□□ -2.28
RPL28P46779 OR2AQ1P-201ENST00000451972 200 ntBASIC0.82□□□□□ -2.28
RPL28P46779 RPS27AP8-201ENST00000452665 445 ntBASIC0.82□□□□□ -2.28
RPL28P46779 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.82□□□□□ -2.28
RPL28P46779 RPL9P9-202ENST00000466501 579 ntBASIC0.82□□□□□ -2.28
RPL28P46779 AC079140.2-201ENST00000506193 142 ntBASIC0.82□□□□□ -2.28
RPL28P46779 AC104806.1-201ENST00000508720 308 ntBASIC0.82□□□□□ -2.28
RPL28P46779 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL28P46779 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL28P46779 RPL21P5-201ENST00000554662 472 ntBASIC0.82□□□□□ -2.28
RPL28P46779 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL28P46779 AC019288.1-201ENST00000557918 224 ntBASIC0.82□□□□□ -2.28
RPL28P46779 MIR4524B-201ENST00000581569 115 ntBASIC0.82□□□□□ -2.28
RPL28P46779 AL034555.1-201ENST00000604816 211 ntBASIC0.82□□□□□ -2.28
RPL28P46779 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.82□□□□□ -2.28
RPL28P46779 MIR8063-201ENST00000621930 81 ntBASIC0.82□□□□□ -2.28
RPL28P46779 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.81□□□□□ -2.28
RPL28P46779 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RPL28P46779 SNORD33-201ENST00000362761 85 ntBASIC0.81□□□□□ -2.28
RPL28P46779 Y_RNA.255-201ENST00000364581 97 ntBASIC0.81□□□□□ -2.28
RPL28P46779 RNU6-636P-201ENST00000384598 107 ntBASIC0.81□□□□□ -2.28
RPL28P46779 RNU6-939P-201ENST00000384634 107 ntBASIC0.81□□□□□ -2.28
RPL28P46779 MIR544A-201ENST00000384855 91 ntBASIC0.81□□□□□ -2.28
RPL28P46779 SNORD115.1-201ENST00000391109 76 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AL161935.2-201ENST00000414627 60 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 FTH1P12-201ENST00000432137 551 ntBASIC0.81□□□□□ -2.28
RPL28P46779 HSPE1P9-201ENST00000440046 311 ntBASIC0.81□□□□□ -2.28
RPL28P46779 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.81□□□□□ -2.28
RPL28P46779 USP9YP17-201ENST00000444617 696 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 EXOSC3P1-201ENST00000448649 500 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 USP9YP25-201ENST00000457708 443 ntBASIC0.81□□□□□ -2.28
RPL28P46779 RNU1-123P-201ENST00000458950 160 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AC022447.4-201ENST00000504053 364 ntBASIC0.81□□□□□ -2.28
RPL28P46779 HSPE1P23-201ENST00000509838 286 ntBASIC0.81□□□□□ -2.28
RPL28P46779 RN7SKP219-201ENST00000516825 296 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 ZNF519P3-201ENST00000557158 1032 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL28P46779 MIR5697-201ENST00000578045 78 ntBASIC0.81□□□□□ -2.28
RPL28P46779 MIR4421-201ENST00000578133 69 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AP001004.1-201ENST00000582468 324 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AC095038.3-201ENST00000634439 195 ntBASIC0.81□□□□□ -2.28
RPL28P46779 AC100821.1-201ENST00000523153 2479 ntBASIC0.8□□□□□ -2.28
RPL28P46779 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
RPL28P46779 RNU4-1-201ENST00000363925 141 ntBASIC0.8□□□□□ -2.28
RPL28P46779 RNU6-457P-201ENST00000363999 107 ntBASIC0.8□□□□□ -2.28
RPL28P46779 RNU4-13P-201ENST00000364019 141 ntBASIC0.8□□□□□ -2.28
RPL28P46779 RNU5E-7P-201ENST00000365290 117 ntBASIC0.8□□□□□ -2.28
RPL28P46779 RNU6-26P-201ENST00000383985 107 ntBASIC0.8□□□□□ -2.28
RPL28P46779 U8.10-201ENST00000384260 133 ntBASIC0.8□□□□□ -2.28
RPL28P46779 SNORA24.1-201ENST00000384401 135 ntBASIC0.8□□□□□ -2.28
RPL28P46779 MIR520A-201ENST00000384862 85 ntBASIC0.8□□□□□ -2.28
RPL28P46779 MTND1P20-201ENST00000430341 950 ntBASIC0.8□□□□□ -2.28
RPL28P46779 MTCYBP39-201ENST00000437562 491 ntBASIC0.8□□□□□ -2.28
RPL28P46779 RPL22P17-201ENST00000438729 315 ntBASIC0.8□□□□□ -2.28
RPL28P46779 ART2BP-201ENST00000453501 499 ntBASIC0.8□□□□□ -2.28
RPL28P46779 AL049829.1-201ENST00000465411 156 ntBASIC0.8□□□□□ -2.28
RPL28P46779 RPL36AP21-201ENST00000490372 323 ntBASIC0.8□□□□□ -2.28
RPL28P46779 AC145146.1-201ENST00000496370 254 ntBASIC0.8□□□□□ -2.28
RPL28P46779 MTCYBP18-201ENST00000501056 747 ntBASIC0.8□□□□□ -2.28
RPL28P46779 MTND3P5-201ENST00000512798 333 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms