Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC012557.2-201ENST00000605919 418 ntBASIC-0.01□□□□□ -2.41
SNCAP37840 AL451064.1-201ENST00000607718 471 ntBASIC-0.01□□□□□ -2.41
SNCAP37840 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.02□□□□□ -2.41
SNCAP37840 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 Y_RNA.40-201ENST00000362645 93 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 RNU6-223P-201ENST00000362830 107 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 RNU1-96P-201ENST00000364163 162 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 RNA5SP259-201ENST00000365541 109 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 MTND1P21-201ENST00000412991 285 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 AC002542.1-201ENST00000440683 193 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 AL353752.1-201ENST00000454946 260 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 snoU13.30-201ENST00000458951 104 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 MED28P2-201ENST00000475771 317 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC-0.02□□□□□ -2.41
SNCAP37840 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.02□□□□□ -2.41
SNCAP37840 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
SNCAP37840 AF038458.1-201ENST00000588406 262 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 VN1R83P-201ENST00000595685 445 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 AC133794.1-201ENST00000602731 914 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 AC112191.3-201ENST00000604371 277 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 AC004808.1-201ENST00000627671 721 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 AL159152.1-201ENST00000635019 2587 ntBASIC-0.02□□□□□ -2.41
SNCAP37840 MTND5P16-201ENST00000460269 1703 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 MIR340-201ENST00000362125 95 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 RNU6-843P-201ENST00000384454 104 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 RNU6-950P-201ENST00000384651 107 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 RNA5SP111-201ENST00000411386 101 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.03□□□□□ -2.41
SNCAP37840 AL139421.1-201ENST00000423010 169 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 AL590556.1-201ENST00000423231 483 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 FABP5P4-201ENST00000437203 171 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.03□□□□□ -2.41
SNCAP37840 DAP3P1-201ENST00000441522 278 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 MTCO3P45-201ENST00000443036 613 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 MTATP6P30-201ENST00000443540 664 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.03□□□□□ -2.41
SNCAP37840 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.03□□□□□ -2.41
SNCAP37840 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.03□□□□□ -2.41
SNCAP37840 AC060771.1-201ENST00000582031 164 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 LARP7P1-201ENST00000605576 316 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 AC100812.1-201ENST00000607622 580 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.03□□□□□ -2.41
SNCAP37840 MIR3529-201ENST00000637713 78 ntBASIC-0.03□□□□□ -2.41
SNCAP37840 RNU6-512P-201ENST00000364438 103 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 TPMTP2-201ENST00000414372 726 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.04□□□□□ -2.42
SNCAP37840 MTCO2P5-201ENST00000422621 426 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 RPS15AP10-201ENST00000432472 382 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.04□□□□□ -2.42
SNCAP37840 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.04□□□□□ -2.42
SNCAP37840 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 AC104982.1-201ENST00000478775 574 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 RN7SKP258-201ENST00000517151 304 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.04□□□□□ -2.42
SNCAP37840 AC022861.1-201ENST00000522981 663 ntBASIC-0.04□□□□□ -2.42
SNCAP37840 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC-0.04□□□□□ -2.42
SNCAP37840 SNORD3E-201ENST00000362899 217 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 SNORA27.3-201ENST00000364937 134 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 RNU4-45P-201ENST00000365469 141 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 RNU6-622P-201ENST00000384272 103 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 RNU6-163P-201ENST00000384396 106 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 RNU6-342P-201ENST00000384521 104 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 RAP1BP3-201ENST00000407180 549 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.05□□□□□ -2.42
SNCAP37840 AC069257.2-201ENST00000441819 155 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC-0.05□□□□□ -2.42
SNCAP37840 RPL37P6-201ENST00000460682 294 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.05□□□□□ -2.42
SNCAP37840 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.05□□□□□ -2.42
SNCAP37840 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.05□□□□□ -2.42
SNCAP37840 RNA5SP436-201ENST00000516020 115 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.05□□□□□ -2.42
SNCAP37840 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.05□□□□□ -2.42
SNCAP37840 AC126365.2-201ENST00000580630 379 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 AC078795.2-201ENST00000602835 1252 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.05□□□□□ -2.42
SNCAP37840 AC084824.4-201ENST00000620106 731 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 SNORD3E-202ENST00000627253 216 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.05□□□□□ -2.42
SNCAP37840 AC107982.1-201ENST00000507171 1300 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
SNCAP37840 RNU6-28P-201ENST00000362378 107 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 SNORD44.1-201ENST00000363202 61 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 RNY1P14-201ENST00000384426 108 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 RNU2-23P-201ENST00000410545 195 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 RPS3AP37-201ENST00000419176 745 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.06□□□□□ -2.42
SNCAP37840 FTH1P25-201ENST00000447665 469 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 snoU13.8-201ENST00000458890 104 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 MTND1P3-201ENST00000484956 952 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.06□□□□□ -2.42
SNCAP37840 AC104629.1-201ENST00000494226 508 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 CYCTP-201ENST00000504253 315 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms