Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MIR4436B1-201ENST00000583272 91 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AC069294.1-201ENST00000608397 350 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 AL110115.1-201ENST00000614396 364 ntBASIC5.05□□□□□ -1.6
CLCN1P35523 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN1P35523 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN1P35523 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN1P35523 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.04□□□□□ -1.6
CLCN1P35523 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.04□□□□□ -1.6
CLCN1P35523 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN1P35523 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN1P35523 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLCN1P35523 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLCN1P35523 RNU6-103P-201ENST00000363686 107 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 RNU6-801P-201ENST00000364087 105 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 Y_RNA.293-201ENST00000364908 93 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 SNORA1.3-201ENST00000384676 136 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 AL133475.1-201ENST00000404414 305 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 RHEBP3-201ENST00000411920 351 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCN1P35523 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCN1P35523 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.04□□□□□ -1.6
CLCN1P35523 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN1P35523 RNU1-6P-201ENST00000516290 144 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 AP001880.2-201ENST00000538233 448 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 AC105129.1-201ENST00000560250 297 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 MIR4431-201ENST00000579990 94 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN1P35523 AC018692.3-201ENST00000623929 123 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN1P35523 ZFRP1-201ENST00000457579 2970 ntBASIC5.04□□□□□ -1.6
CLCN1P35523 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCN1P35523 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CLCN1P35523 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CLCN1P35523 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCN1P35523 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCN1P35523 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 Y_RNA.287-201ENST00000364853 94 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 SNORA56-201ENST00000383966 129 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 RNU6-578P-201ENST00000390980 103 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 SNORA26.5-201ENST00000391215 123 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 RNA5SP113-201ENST00000410486 84 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 PTGES3P4-201ENST00000426243 356 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.03□□□□□ -1.6
CLCN1P35523 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCN1P35523 AC107027.2-201ENST00000512197 115 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 SNORA25.12-201ENST00000516202 82 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 RNU7-121P-201ENST00000516604 62 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCN1P35523 IGKV2D-19-201ENST00000523346 262 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 DEFB131C-201ENST00000528817 165 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.03□□□□□ -1.6
CLCN1P35523 SNORD11B-201ENST00000607707 90 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 MIR486-1-201ENST00000612171 68 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 AC013791.1-201ENST00000616619 62 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 AC010329.5-201ENST00000623497 2174 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
CLCN1P35523 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCN1P35523 AC010300.1-201ENST00000600671 5134 ntBASIC5.03□□□□□ -1.6
CLCN1P35523 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCN1P35523 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCN1P35523 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCN1P35523 RNU4-11P-201ENST00000365287 132 ntBASIC5.02□□□□□ -1.61
CLCN1P35523 MIR513C-201ENST00000401352 84 ntBASIC5.02□□□□□ -1.61
CLCN1P35523 AL031003.1-201ENST00000404229 172 ntBASIC5.02□□□□□ -1.61
CLCN1P35523 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCN1P35523 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCN1P35523 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCN1P35523 MIR3609-201ENST00000582661 80 ntBASIC5.02□□□□□ -1.61
CLCN1P35523 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCN1P35523 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCN1P35523 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.02□□□□□ -1.61
CLCN1P35523 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCN1P35523 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLCN1P35523 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.01□□□□□ -1.61
CLCN1P35523 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.01□□□□□ -1.61
CLCN1P35523 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLCN1P35523 AL672296.1-201ENST00000427780 2158 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLCN1P35523 RNU4-10P-201ENST00000364383 140 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 SNORD87-201ENST00000364849 89 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 AL133412.1-201ENST00000380194 2992 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 RNU1-63P-201ENST00000383902 164 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 SNORA8.3-201ENST00000384679 139 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 RNU6-19P-201ENST00000384718 107 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLCN1P35523 RPL30P13-201ENST00000418873 348 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 AC027124.2-201ENST00000428249 105 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 AL135790.2-201ENST00000437701 267 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 AC006463.2-201ENST00000473326 348 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLCN1P35523 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.01□□□□□ -1.61
CLCN1P35523 RNA5SP143-201ENST00000516936 115 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 RNU1-117P-201ENST00000517041 158 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC5.01□□□□□ -1.61
CLCN1P35523 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.01□□□□□ -1.61
CLCN1P35523 PCGEM1.1-201ENST00000613431 131 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 AC005562.2-201ENST00000618264 111 ntBASIC5.01□□□□□ -1.61
CLCN1P35523 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.01□□□□□ -1.61
CLCN1P35523 AF127577.6-201ENST00000623352 2191 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms