Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL117187.1-201ENST00000555482 181 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC6A4P31645 AC004584.2-201ENST00000570407 410 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 MIR4325-201ENST00000583049 90 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AL158827.2-201ENST00000602494 330 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AC016727.2-201ENST00000603988 621 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AC068831.7-201ENST00000616954 363 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 XIST_intron.1-201ENST00000619444 68 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AC018692.3-201ENST00000623929 123 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AC090617.7-201ENST00000623952 126 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC6A4P31645 AL691447.3-201ENST00000635020 330 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 MIR3199-2-201ENST00000636243 86 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A4P31645 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A4P31645 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC6A4P31645 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A4P31645 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A4P31645 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
SLC6A4P31645 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC6A4P31645 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SLC6A4P31645 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC6A4P31645 SNORD50.1-201ENST00000362987 71 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 Y_RNA.144-201ENST00000363521 113 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 U3.6-201ENST00000363622 211 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 SNORD116-20-201ENST00000384529 92 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 Y_RNA.526-201ENST00000384572 110 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SLC6A4P31645 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC6A4P31645 MRPS18CP6-201ENST00000423587 223 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 AC079354.2-201ENST00000453523 154 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 snoU13.28-201ENST00000459235 104 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 AL049830.2-201ENST00000480072 201 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC6A4P31645 SNORA40.14-201ENST00000516543 86 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 RNU6-1137P-201ENST00000517073 99 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SLC6A4P31645 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.29□□□□□ -1.88
SLC6A4P31645 MTND4LP5-201ENST00000605152 292 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC6A4P31645 AC006111.3-201ENST00000622137 383 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 MIR3529-201ENST00000637713 78 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
SLC6A4P31645 AC093010.3-201ENST00000570269 15214 ntBASIC3.29□□□□□ -1.88
SLC6A4P31645 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
SLC6A4P31645 AC010680.1-201ENST00000590024 3590 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 MTND5P27-201ENST00000428871 1720 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SLC6A4P31645 Y_RNA.133-201ENST00000363428 110 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
SLC6A4P31645 Y_RNA.424-201ENST00000384063 103 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 RNU6-1105P-201ENST00000384774 107 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SLC6A4P31645 UBA52P6-201ENST00000399822 382 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AL356057.3-201ENST00000402607 340 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 RNU6-101P-201ENST00000410323 104 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 EIF1AXP1-201ENST00000419267 435 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 BX679664.1-201ENST00000434429 253 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A4P31645 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A4P31645 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A4P31645 AC012308.1-201ENST00000451232 178 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A4P31645 AC112492.4-201ENST00000456549 352 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 RNU7-23P-201ENST00000459465 62 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AC010401.1-201ENST00000463867 348 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A4P31645 MRPL42P6-201ENST00000486397 371 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AC097462.2-201ENST00000504623 481 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AC105758.1-201ENST00000506038 399 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A4P31645 RNU6-1046P-201ENST00000516538 107 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AC091144.1-201ENST00000519573 138 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AL590705.4-201ENST00000532209 134 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC6A4P31645 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC6A4P31645 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 UBL5P2-201ENST00000583788 219 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 AC020895.1-201ENST00000595362 272 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 MIR6852-201ENST00000621699 66 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A4P31645 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC6A4P31645 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A4P31645 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A4P31645 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A4P31645 AC091152.2-201ENST00000591628 2569 ntBASIC3.28□□□□□ -1.88
SLC6A4P31645 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SLC6A4P31645 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A4P31645 AC007496.3-201ENST00000624987 3443 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A4P31645 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
SLC6A4P31645 Y_RNA.123-201ENST00000363338 102 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 RNU4-42P-201ENST00000364738 142 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 RNU6-487P-201ENST00000365430 104 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms