Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA10P31260 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA10P31260 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
HOXA10P31260 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA10P31260 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA10P31260 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA10P31260 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA10P31260 RNU6-384P-201ENST00000364900 104 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 RNA5SP167-201ENST00000365461 116 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 RNA5SP56-201ENST00000410277 118 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 RNU5A-5P-201ENST00000411054 116 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 RNA5SP306-201ENST00000411087 107 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA10P31260 AL160314.1-201ENST00000490836 438 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 RN7SL504P-201ENST00000494496 287 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA10P31260 RNY3P16-201ENST00000516338 101 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 MIR2114-201ENST00000516645 80 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 SNORA27.4-201ENST00000516650 95 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 RNU6-1315P-201ENST00000517187 99 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA10P31260 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA10P31260 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA10P31260 MIR5680-201ENST00000577577 84 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 Z99571.1-201ENST00000636677 394 ntBASIC4.32□□□□□ -1.72
HOXA10P31260 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXA10P31260 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA10P31260 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA10P31260 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXA10P31260 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HOXA10P31260 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA10P31260 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA10P31260 RNA5SP374-201ENST00000362939 125 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 Y_RNA.308-201ENST00000365043 101 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 RNU6-395P-201ENST00000365662 106 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 RNU6-449P-201ENST00000383914 107 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 RNU6-514P-201ENST00000384208 107 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 MIR301A-201ENST00000385261 86 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 RNU2-43P-201ENST00000410306 190 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXA10P31260 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 TOMM20P4-201ENST00000427861 435 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXA10P31260 S100A11P2-201ENST00000467589 312 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 RPL23AP45-201ENST00000476406 468 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 RN7SKP277-201ENST00000516895 283 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXA10P31260 AL157871.3-201ENST00000557231 293 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA10P31260 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HOXA10P31260 AC007656.2-201ENST00000624902 4547 ntBASIC4.31□□□□□ -1.72
HOXA10P31260 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HOXA10P31260 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA10P31260 FAM35DP-201ENST00000323387 2712 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA10P31260 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA10P31260 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HOXA10P31260 RNU6-227P-201ENST00000362865 103 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 Y_RNA.215-201ENST00000364204 112 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 RNU6-1289P-201ENST00000384431 106 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 Y_RNA.597-201ENST00000410463 100 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 AL592045.1-201ENST00000429867 352 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXA10P31260 RN7SL594P-201ENST00000470590 287 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 AP001025.1-201ENST00000486139 332 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 AC091959.1-201ENST00000495857 238 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXA10P31260 AC023141.12-201ENST00000512399 199 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 RNU6-927P-201ENST00000516199 100 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 RNU6-840P-201ENST00000517275 65 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA10P31260 AC103996.1-201ENST00000555468 102 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.3□□□□□ -1.72
HOXA10P31260 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 SCARNA15.3-201ENST00000626315 122 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 SCARNA4.1-201ENST00000628597 123 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 AL035425.3-201ENST00000564206 4996 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HOXA10P31260 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA10P31260 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
HOXA10P31260 OTUD4P1-201ENST00000237841 3067 ntBASIC4.3□□□□□ -1.72
HOXA10P31260 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA10P31260 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA10P31260 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA10P31260 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA10P31260 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXA10P31260 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
HOXA10P31260 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HOXA10P31260 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HOXA10P31260 Y_RNA.33-201ENST00000362591 102 ntBASIC4.29□□□□□ -1.72
HOXA10P31260 Z98941.1-201ENST00000407764 100 ntBASIC4.29□□□□□ -1.72
HOXA10P31260 OOSP1P1-201ENST00000423265 274 ntBASIC4.29□□□□□ -1.72
HOXA10P31260 AC010154.1-201ENST00000425857 269 ntBASIC4.29□□□□□ -1.72
HOXA10P31260 AC087588.1-201ENST00000462203 316 ntBASIC4.29□□□□□ -1.72
HOXA10P31260 AC114982.1-201ENST00000469402 321 ntBASIC4.29□□□□□ -1.72
HOXA10P31260 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA10P31260 SNORA31.22-201ENST00000517204 135 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms