Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC023050.2-201ENST00000544968 387 ntBASIC1□□□□□ -2.25
CD40LGP29965 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1□□□□□ -2.25
CD40LGP29965 MIR3660-201ENST00000584845 100 ntBASIC1□□□□□ -2.25
CD40LGP29965 AC073413.2-201ENST00000604332 360 ntBASIC1□□□□□ -2.25
CD40LGP29965 AC144521.1-201ENST00000607148 956 ntBASIC1□□□□□ -2.25
CD40LGP29965 RMST_4.1-201ENST00000616886 107 ntBASIC1□□□□□ -2.25
CD40LGP29965 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 RNU1-22P-201ENST00000363334 158 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 SNORA4.1-201ENST00000364263 144 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 RNU6-26P-201ENST00000383985 107 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 SNORA29-201ENST00000384183 140 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 RNU4-22P-201ENST00000411058 166 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 AP1B1P2-201ENST00000416196 106 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.99□□□□□ -2.25
CD40LGP29965 MTND1P30-201ENST00000441241 901 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 PGBD4P5-201ENST00000445958 426 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.99□□□□□ -2.25
CD40LGP29965 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.99□□□□□ -2.25
CD40LGP29965 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.99□□□□□ -2.25
CD40LGP29965 AL122001.1-201ENST00000457027 370 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 RNU2-10P-201ENST00000516375 211 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 SNORD60.2-201ENST00000516883 86 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.99□□□□□ -2.25
CD40LGP29965 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 AC018889.1-201ENST00000605372 397 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 MIR8065-201ENST00000620577 100 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
CD40LGP29965 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CD40LGP29965 Y_RNA.46-201ENST00000362695 102 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 RNY4P24-201ENST00000362735 96 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 SNORA17.3-201ENST00000391159 129 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 RPS3AP36-201ENST00000398190 775 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.98□□□□□ -2.25
CD40LGP29965 RPL23AP30-201ENST00000432419 501 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.98□□□□□ -2.25
CD40LGP29965 AC134050.1-201ENST00000495088 933 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 SNORD116-28-201ENST00000516123 91 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 RNA5SP481-201ENST00000516814 122 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.98□□□□□ -2.25
CD40LGP29965 SUMO2P18-201ENST00000518873 252 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.98□□□□□ -2.25
CD40LGP29965 CENPUP1-201ENST00000526649 1202 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 AC123904.2-201ENST00000548059 300 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.98□□□□□ -2.25
CD40LGP29965 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 AL359547.2-201ENST00000615810 418 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 AC099786.3-201ENST00000565735 1410 ntBASIC0.98□□□□□ -2.25
CD40LGP29965 RNU6-1222P-201ENST00000384615 107 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 MIR548B-201ENST00000385247 97 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 RPL23AP36-201ENST00000413895 458 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 RPS15AP12-201ENST00000419498 388 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.97□□□□□ -2.25
CD40LGP29965 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.97□□□□□ -2.25
CD40LGP29965 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.97□□□□□ -2.25
CD40LGP29965 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.97□□□□□ -2.25
CD40LGP29965 EEF1A1P39-201ENST00000440791 250 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 AC007969.2-201ENST00000441891 191 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
CD40LGP29965 RNU5F-2P-201ENST00000516066 82 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 RNA5SP437-201ENST00000517249 129 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 MIR548AC-201ENST00000585049 88 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.97□□□□□ -2.25
CD40LGP29965 NIFKP6-201ENST00000598115 845 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 AC090578.1-201ENST00000604955 591 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 snoU13.31-201ENST00000607291 104 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 AC009033.1-201ENST00000624279 431 ntBASIC0.97□□□□□ -2.25
CD40LGP29965 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CD40LGP29965 AC010615.1-201ENST00000594254 1764 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 MIR340-201ENST00000362125 95 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 RNU6-968P-201ENST00000384076 107 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 RNU2-7P-201ENST00000410794 178 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 MTATP6P20-201ENST00000414147 562 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 RPS3AP37-201ENST00000419176 745 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 AC114982.1-201ENST00000469402 321 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.96□□□□□ -2.26
CD40LGP29965 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.96□□□□□ -2.26
CD40LGP29965 AC115990.1-201ENST00000526957 301 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.96□□□□□ -2.26
CD40LGP29965 AL512310.8-201ENST00000550183 120 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 AC023043.2-201ENST00000589678 1026 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 DEFB131E-202ENST00000602581 683 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 AC069114.2-201ENST00000604699 304 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 RMST_7.1-201ENST00000621935 268 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 AC106858.1-201ENST00000637497 429 ntBASIC0.96□□□□□ -2.26
CD40LGP29965 AC245060.5-201ENST00000610778 3293 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 RNY4P16-201ENST00000364768 94 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 RNU6-384P-201ENST00000364900 104 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.95□□□□□ -2.26
CD40LGP29965 AC006366.1-201ENST00000422002 759 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.95□□□□□ -2.26
CD40LGP29965 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.95□□□□□ -2.26
CD40LGP29965 AL358794.1-201ENST00000445689 381 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.95□□□□□ -2.26
CD40LGP29965 AC104982.1-201ENST00000478775 574 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms