Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC119751.4-201ENST00000507498 357 ntBASIC0.77□□□□□ -2.29
CASP1P29466 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
CASP1P29466 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.77□□□□□ -2.29
CASP1P29466 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.77□□□□□ -2.29
CASP1P29466 VN1R82P-201ENST00000601481 356 ntBASIC0.77□□□□□ -2.29
CASP1P29466 AP000654.2-201ENST00000605633 586 ntBASIC0.77□□□□□ -2.29
CASP1P29466 AL512427.1-201ENST00000618593 349 ntBASIC0.77□□□□□ -2.29
CASP1P29466 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CASP1P29466 SNORD33-201ENST00000362761 85 ntBASIC0.76□□□□□ -2.29
CASP1P29466 RNU6-360P-201ENST00000390944 104 ntBASIC0.76□□□□□ -2.29
CASP1P29466 AL357139.1-201ENST00000407792 426 ntBASIC0.76□□□□□ -2.29
CASP1P29466 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.76□□□□□ -2.29
CASP1P29466 AL627311.1-201ENST00000431514 115 ntBASIC0.76□□□□□ -2.29
CASP1P29466 RPS25P9-201ENST00000435591 252 ntBASIC0.76□□□□□ -2.29
CASP1P29466 LARP1BP3-201ENST00000437229 869 ntBASIC0.76□□□□□ -2.29
CASP1P29466 RPS27AP8-201ENST00000452665 445 ntBASIC0.76□□□□□ -2.29
CASP1P29466 RNA5SP490-201ENST00000517141 136 ntBASIC0.76□□□□□ -2.29
CASP1P29466 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.76□□□□□ -2.29
CASP1P29466 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.76□□□□□ -2.29
CASP1P29466 AC136443.5-201ENST00000603741 370 ntBASIC0.76□□□□□ -2.29
CASP1P29466 AL022154.1-201ENST00000604698 785 ntBASIC0.76□□□□□ -2.29
CASP1P29466 AC108706.1-201ENST00000611053 297 ntBASIC0.76□□□□□ -2.29
CASP1P29466 AC007792.1-201ENST00000623023 402 ntBASIC0.76□□□□□ -2.29
CASP1P29466 AC009033.1-201ENST00000624279 431 ntBASIC0.76□□□□□ -2.29
CASP1P29466 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
CASP1P29466 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
CASP1P29466 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CASP1P29466 MIR340-201ENST00000362125 95 ntBASIC0.75□□□□□ -2.29
CASP1P29466 MIR412-201ENST00000362142 91 ntBASIC0.75□□□□□ -2.29
CASP1P29466 RNU6-560P-201ENST00000364007 108 ntBASIC0.75□□□□□ -2.29
CASP1P29466 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CASP1P29466 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CASP1P29466 RNU6-190P-201ENST00000384154 102 ntBASIC0.75□□□□□ -2.29
CASP1P29466 SNORA29-201ENST00000384183 140 ntBASIC0.75□□□□□ -2.29
CASP1P29466 MIR10A-201ENST00000385043 110 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
CASP1P29466 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.75□□□□□ -2.29
CASP1P29466 RNA5SP269-201ENST00000459032 137 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AC114982.1-201ENST00000469402 321 ntBASIC0.75□□□□□ -2.29
CASP1P29466 MIR449C-201ENST00000516047 92 ntBASIC0.75□□□□□ -2.29
CASP1P29466 Y_RNA.687-201ENST00000516558 91 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.75□□□□□ -2.29
CASP1P29466 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.75□□□□□ -2.29
CASP1P29466 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.75□□□□□ -2.29
CASP1P29466 HMGB1P33-201ENST00000563485 527 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AL391001.1-201ENST00000602747 715 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AL596327.1-201ENST00000603629 213 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AC112220.3-201ENST00000605502 502 ntBASIC0.75□□□□□ -2.29
CASP1P29466 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AC024940.5-201ENST00000622889 474 ntBASIC0.75□□□□□ -2.29
CASP1P29466 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.75□□□□□ -2.29
CASP1P29466 AC092104.1-201ENST00000497346 1441 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.74□□□□□ -2.29
CASP1P29466 MTND1P30-201ENST00000441241 901 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.74□□□□□ -2.29
CASP1P29466 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.74□□□□□ -2.29
CASP1P29466 RPS29P1-201ENST00000465274 159 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AC079395.1-201ENST00000510981 262 ntBASIC0.74□□□□□ -2.29
CASP1P29466 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.74□□□□□ -2.29
CASP1P29466 AC112206.3-201ENST00000514578 389 ntBASIC0.74□□□□□ -2.29
CASP1P29466 RNA5SP384-201ENST00000516615 116 ntBASIC0.74□□□□□ -2.29
CASP1P29466 SNORA43.2-201ENST00000516652 128 ntBASIC0.74□□□□□ -2.29
CASP1P29466 RNU6-1092P-201ENST00000516955 87 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AP003484.1-201ENST00000530974 250 ntBASIC0.74□□□□□ -2.29
CASP1P29466 MIR3146-201ENST00000580367 79 ntBASIC0.74□□□□□ -2.29
CASP1P29466 MTATP6P3-201ENST00000581686 676 ntBASIC0.74□□□□□ -2.29
CASP1P29466 FAM106DP-201ENST00000586416 501 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.74□□□□□ -2.29
CASP1P29466 AC090578.1-201ENST00000604955 591 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AC008945.2-201ENST00000606056 604 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AL020996.3-201ENST00000606617 222 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.74□□□□□ -2.29
CASP1P29466 MIR8070-201ENST00000616510 88 ntBASIC0.74□□□□□ -2.29
CASP1P29466 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.74□□□□□ -2.29
CASP1P29466 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.74□□□□□ -2.29
CASP1P29466 Y_RNA.4-201ENST00000362333 112 ntBASIC0.73□□□□□ -2.29
CASP1P29466 RNU6-462P-201ENST00000362659 105 ntBASIC0.73□□□□□ -2.29
CASP1P29466 SNORD56.1-201ENST00000362913 68 ntBASIC0.73□□□□□ -2.29
CASP1P29466 Y_RNA.164-201ENST00000363709 102 ntBASIC0.73□□□□□ -2.29
CASP1P29466 Y_RNA.255-201ENST00000364581 97 ntBASIC0.73□□□□□ -2.29
CASP1P29466 RNU6-946P-201ENST00000383878 107 ntBASIC0.73□□□□□ -2.29
CASP1P29466 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
CASP1P29466 MIR520A-201ENST00000384862 85 ntBASIC0.73□□□□□ -2.29
CASP1P29466 FTH1P12-201ENST00000432137 551 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AL591043.1-201ENST00000432461 424 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AC245047.4-201ENST00000433189 144 ntBASIC0.73□□□□□ -2.29
CASP1P29466 NDUFB1P2-201ENST00000449477 176 ntBASIC0.73□□□□□ -2.29
CASP1P29466 HSPE1P13-201ENST00000451143 297 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.73□□□□□ -2.29
CASP1P29466 AL122001.1-201ENST00000457027 370 ntBASIC0.73□□□□□ -2.29
CASP1P29466 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.73□□□□□ -2.29
CASP1P29466 SNORD116-28-201ENST00000516123 91 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AC004812.1-201ENST00000540773 146 ntBASIC0.73□□□□□ -2.29
CASP1P29466 BNIP3P6-201ENST00000549284 499 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AL512310.8-201ENST00000550183 120 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AC136932.1-201ENST00000574771 208 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.73□□□□□ -2.29
CASP1P29466 AC091135.1-201ENST00000585943 307 ntBASIC0.73□□□□□ -2.29
CASP1P29466 AL138889.2-201ENST00000603883 242 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms