Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 USP9YP29-201ENST00000445112 563 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC132479.1-201ENST00000449160 144 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 USP9YP12-201ENST00000450481 570 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A3P25940 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A3P25940 EIF4EP3-201ENST00000498782 656 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A3P25940 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A3P25940 Y_RNA.672-201ENST00000516289 104 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A3P25940 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A3P25940 CYP3A137P-201ENST00000562436 69 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.26□□□□□ -2.21
COL5A3P25940 MIR3913-1-201ENST00000577744 102 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC073544.2-201ENST00000601155 540 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AL355297.2-201ENST00000604792 129 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC090578.1-201ENST00000604955 591 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC004805.2-201ENST00000605382 482 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC108747.1-201ENST00000609508 535 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC138749.5-201ENST00000611461 208 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC008250.2-201ENST00000615261 205 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC116165.2-201ENST00000616705 206 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 AC072046.2-201ENST00000618366 268 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 FRG1KP-201ENST00000623592 341 ntBASIC1.26□□□□□ -2.21
COL5A3P25940 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
COL5A3P25940 AL390237.1-201ENST00000404226 1415 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 RNU6-181P-201ENST00000363225 107 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 RNY4P16-201ENST00000364768 94 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
COL5A3P25940 CDK8P2-201ENST00000415020 547 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 OR51A5P-201ENST00000415429 942 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 ELOCP4-201ENST00000420090 333 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.25□□□□□ -2.21
COL5A3P25940 AL365338.1-201ENST00000422282 858 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC007919.1-201ENST00000429380 217 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 MTND1P28-201ENST00000435623 950 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.25□□□□□ -2.21
COL5A3P25940 RPL26P9-201ENST00000457466 433 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.25□□□□□ -2.21
COL5A3P25940 RNU6-445P-201ENST00000516949 107 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC090572.1-201ENST00000519251 160 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC022616.6-201ENST00000520479 119 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.25□□□□□ -2.21
COL5A3P25940 AC093012.1-202ENST00000549403 582 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AL590229.1-201ENST00000603497 542 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AL359999.1-201ENST00000604513 294 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 RN7SKP299-201ENST00000606679 301 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC135507.1-201ENST00000607214 561 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC011939.3-201ENST00000613686 466 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC130324.3-201ENST00000614165 542 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AP001506.1-201ENST00000615444 211 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 AC090582.1-201ENST00000636321 199 ntBASIC1.25□□□□□ -2.21
COL5A3P25940 FARSBP1-201ENST00000435808 1778 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 FGF7P2-201ENST00000332473 296 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 RNU4-21P-201ENST00000362802 126 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 RNU6-884P-201ENST00000363889 107 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 RNU6-188P-201ENST00000364207 107 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
COL5A3P25940 RNU6-750P-201ENST00000390946 107 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 RNU11-5P-201ENST00000391216 129 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A3P25940 NDUFS5P4-201ENST00000412983 318 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 CYCSP48-201ENST00000417124 323 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A3P25940 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A3P25940 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.24□□□□□ -2.21
COL5A3P25940 Z83846.1-201ENST00000446798 265 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A3P25940 Vault.3-201ENST00000516676 95 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 SCARNA11.3-201ENST00000517276 130 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A3P25940 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A3P25940 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.24□□□□□ -2.21
COL5A3P25940 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A3P25940 MIR1273G-201ENST00000577677 100 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 MIR3682-201ENST00000581338 84 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AC002545.1-201ENST00000592511 181 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 Z84480.1-201ENST00000605131 311 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AC087752.4-201ENST00000605911 462 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AL365204.3-201ENST00000612448 685 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 uc_338.14-201ENST00000613162 166 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.24□□□□□ -2.21
COL5A3P25940 U2.21-201ENST00000637295 81 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 MIR6086-201ENST00000638065 55 ntBASIC1.24□□□□□ -2.21
COL5A3P25940 AC010329.5-201ENST00000623497 2174 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 SNORD56.2-201ENST00000363242 71 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 Y_RNA.194-201ENST00000363985 102 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RNU6-946P-201ENST00000383878 107 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 MIR193B-201ENST00000384907 83 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL513475.1-201ENST00000406602 315 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RNA5SP111-201ENST00000411386 101 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A3P25940 AC119618.1-201ENST00000434191 222 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 SNRPEP9-201ENST00000436794 238 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A3P25940 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.23□□□□□ -2.21
COL5A3P25940 SNORA31.3-201ENST00000516029 96 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 RNU6-1092P-201ENST00000516955 87 ntBASIC1.23□□□□□ -2.21
COL5A3P25940 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms