Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC005951.2-201ENST00000576282 495 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 SNORD84-203ENST00000584275 78 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 OR1M4P-201ENST00000589199 287 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 AC012669.1-201ENST00000603209 283 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 AL645944.1-201ENST00000603857 493 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 AL158032.1-201ENST00000605401 106 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 RNA5SP108-201ENST00000605921 117 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 MIR8076-201ENST00000611401 83 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 AP001282.2-201ENST00000616149 309 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 MIR7843-201ENST00000622274 79 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 AL450326.2-201ENST00000421913 1962 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 ZNF658B-202ENST00000615961 3375 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
POLR2AP24928 AL391987.6-201ENST00000305671 199 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 RNU6-1059P-201ENST00000363752 98 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 RNU6-76P-201ENST00000384060 104 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 MRPL35P1-201ENST00000404272 572 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 SSXP9-201ENST00000417503 292 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 MTATP6P4-201ENST00000427725 675 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR2AP24928 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR2AP24928 HMGB3P17-201ENST00000504195 649 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AP006587.4-201ENST00000526053 529 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR2AP24928 AK6P2-201ENST00000549020 471 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 MIR3128-201ENST00000581957 66 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AC025946.2-201ENST00000603398 234 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2AP24928 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR2AP24928 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR2AP24928 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
POLR2AP24928 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2AP24928 Y_RNA.106-201ENST00000363189 100 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 Y_RNA.274-201ENST00000364714 101 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
POLR2AP24928 Y_RNA.539-201ENST00000384635 107 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 Y_RNA.551-201ENST00000384661 102 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 Y_RNA.556-201ENST00000384677 113 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 MIR153-1-201ENST00000384914 90 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 LAP3P1-201ENST00000403648 294 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 RNU6-121P-201ENST00000410525 99 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AL137014.1-201ENST00000420490 1226 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AL590135.1-201ENST00000422215 156 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 MTCO1P39-201ENST00000426148 480 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AL133396.1-201ENST00000432048 687 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 MTCO3P29-201ENST00000432119 779 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 CKS1BP5-201ENST00000434172 273 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 IFNWP4-201ENST00000453148 294 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 RRN3P3-201ENST00000549207 578 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.32□□□□□ -1.88
POLR2AP24928 AC104695.3-201ENST00000604052 296 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AC006111.3-201ENST00000622137 383 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 AC108206.1-201ENST00000570186 4159 ntBASIC3.32□□□□□ -1.88
POLR2AP24928 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2AP24928 AC010733.2-201ENST00000589496 5702 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNA5SP502-201ENST00000362694 119 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 MIR504-201ENST00000385065 83 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNA5SP56-201ENST00000410277 118 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNU2-33P-201ENST00000410344 192 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNU6-130P-201ENST00000411112 103 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 TMEM167AP1-201ENST00000423409 219 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR2AP24928 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR2AP24928 RPL37P6-201ENST00000460682 294 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNU6-840P-201ENST00000517275 65 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 AC010186.2-204ENST00000537668 439 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2AP24928 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2AP24928 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
POLR2AP24928 RNU6-837P-201ENST00000391056 108 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 BTF3L4P2-201ENST00000392798 346 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 MIR887-201ENST00000401258 79 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNU2-38P-201ENST00000410856 79 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RPS15AP6-201ENST00000420703 385 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RPS29P27-201ENST00000463711 170 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 AC078817.1-201ENST00000492623 435 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 SNORA31.6-201ENST00000516241 130 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNU6-1338P-201ENST00000516328 91 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNU6-1256P-201ENST00000516539 103 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 RNU6-798P-201ENST00000516912 103 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 MIR1244-1-201ENST00000612829 85 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 MIR6817-201ENST00000615588 66 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 AL512643.1-201ENST00000635735 524 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 MIR1244-3-201ENST00000635744 85 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 MIR1244-2-201ENST00000636449 85 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 MIR1244-4-202ENST00000636813 85 ntBASIC3.31□□□□□ -1.88
POLR2AP24928 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR2AP24928 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR2AP24928 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR2AP24928 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR2AP24928 RNU6-187P-201ENST00000384139 106 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 CYCSP33-201ENST00000414485 327 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR2AP24928 AC090774.1-201ENST00000435925 246 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 NDUFB1P2-201ENST00000449477 176 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 AC087588.1-201ENST00000462203 316 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 AC018437.1-201ENST00000492214 406 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms