Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.46□□□□□ -2.18
USF1P22415 MIR4419B-201ENST00000577260 68 ntBASIC1.46□□□□□ -2.18
USF1P22415 AC073539.2-201ENST00000597113 165 ntBASIC1.46□□□□□ -2.18
USF1P22415 AC022022.2-201ENST00000602989 360 ntBASIC1.46□□□□□ -2.18
USF1P22415 CYP2C61P-201ENST00000604072 290 ntBASIC1.46□□□□□ -2.18
USF1P22415 SEPT7P9-203ENST00000604116 343 ntBASIC1.46□□□□□ -2.18
USF1P22415 AL022345.1-201ENST00000607292 135 ntBASIC1.46□□□□□ -2.18
USF1P22415 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.46□□□□□ -2.18
USF1P22415 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
USF1P22415 AC009159.2-201ENST00000617603 606 ntBASIC1.46□□□□□ -2.18
USF1P22415 AC099842.1-201ENST00000619919 596 ntBASIC1.46□□□□□ -2.18
USF1P22415 MTND5P17-201ENST00000418405 1603 ntBASIC1.46□□□□□ -2.18
USF1P22415 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
USF1P22415 MTND4P4-201ENST00000439033 1366 ntBASIC1.46□□□□□ -2.18
USF1P22415 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USF1P22415 RNU6-661P-201ENST00000362409 107 ntBASIC1.45□□□□□ -2.18
USF1P22415 RNU6-743P-201ENST00000364151 106 ntBASIC1.45□□□□□ -2.18
USF1P22415 HIGD1AP15-201ENST00000416198 280 ntBASIC1.45□□□□□ -2.18
USF1P22415 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.45□□□□□ -2.18
USF1P22415 MTND5P25-201ENST00000430499 799 ntBASIC1.45□□□□□ -2.18
USF1P22415 AL645568.3-201ENST00000433683 316 ntBASIC1.45□□□□□ -2.18
USF1P22415 AC104850.1-201ENST00000435940 476 ntBASIC1.45□□□□□ -2.18
USF1P22415 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.45□□□□□ -2.18
USF1P22415 AL122001.1-201ENST00000457027 370 ntBASIC1.45□□□□□ -2.18
USF1P22415 RNU1-98P-201ENST00000458992 160 ntBASIC1.45□□□□□ -2.18
USF1P22415 RNA5SP57-201ENST00000459463 123 ntBASIC1.45□□□□□ -2.18
USF1P22415 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.45□□□□□ -2.18
USF1P22415 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.45□□□□□ -2.18
USF1P22415 RNU6-1129P-201ENST00000515964 104 ntBASIC1.45□□□□□ -2.18
USF1P22415 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.45□□□□□ -2.18
USF1P22415 AC137800.2-201ENST00000574375 120 ntBASIC1.45□□□□□ -2.18
USF1P22415 MIR4255-201ENST00000579351 72 ntBASIC1.45□□□□□ -2.18
USF1P22415 AC090616.2-202ENST00000584248 222 ntBASIC1.45□□□□□ -2.18
USF1P22415 BNIP3P8-201ENST00000597863 560 ntBASIC1.45□□□□□ -2.18
USF1P22415 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.45□□□□□ -2.18
USF1P22415 WISP1-OT1-201ENST00000602893 642 ntBASIC1.45□□□□□ -2.18
USF1P22415 AC063943.3-201ENST00000615562 356 ntBASIC1.45□□□□□ -2.18
USF1P22415 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.45□□□□□ -2.18
USF1P22415 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.45□□□□□ -2.18
USF1P22415 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
USF1P22415 RNU6-527P-201ENST00000363425 104 ntBASIC1.44□□□□□ -2.18
USF1P22415 SNORA72.3-201ENST00000365074 132 ntBASIC1.44□□□□□ -2.18
USF1P22415 SNORD115-7-201ENST00000365306 82 ntBASIC1.44□□□□□ -2.18
USF1P22415 RNU6-1222P-201ENST00000384615 107 ntBASIC1.44□□□□□ -2.18
USF1P22415 MIR597-201ENST00000384968 97 ntBASIC1.44□□□□□ -2.18
USF1P22415 RNU4-62P-201ENST00000410125 130 ntBASIC1.44□□□□□ -2.18
USF1P22415 RNU2-3P-201ENST00000410144 191 ntBASIC1.44□□□□□ -2.18
USF1P22415 RNA5SP501-201ENST00000410990 112 ntBASIC1.44□□□□□ -2.18
USF1P22415 POLHP1-201ENST00000411806 470 ntBASIC1.44□□□□□ -2.18
USF1P22415 OR6C66P-201ENST00000414917 930 ntBASIC1.44□□□□□ -2.18
USF1P22415 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.44□□□□□ -2.18
USF1P22415 AC013410.2-201ENST00000422627 201 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC010099.3-201ENST00000423896 409 ntBASIC1.44□□□□□ -2.18
USF1P22415 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.44□□□□□ -2.18
USF1P22415 AC073614.1-201ENST00000438690 650 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.44□□□□□ -2.18
USF1P22415 AC104806.1-201ENST00000508720 308 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC093259.1-201ENST00000509755 300 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.44□□□□□ -2.18
USF1P22415 AC074344.1-201ENST00000512823 224 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC104136.1-201ENST00000512969 394 ntBASIC1.44□□□□□ -2.18
USF1P22415 Y_RNA.673-201ENST00000516306 88 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC090572.1-201ENST00000519251 160 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.44□□□□□ -2.18
USF1P22415 AC115990.1-201ENST00000526957 301 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC087883.1-201ENST00000551882 391 ntBASIC1.44□□□□□ -2.18
USF1P22415 HSBP1P1-201ENST00000555205 166 ntBASIC1.44□□□□□ -2.18
USF1P22415 SUB1P3-201ENST00000564581 315 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.44□□□□□ -2.18
USF1P22415 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.44□□□□□ -2.18
USF1P22415 MIR3682-201ENST00000581338 84 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC092354.1-201ENST00000606057 376 ntBASIC1.44□□□□□ -2.18
USF1P22415 AC131159.1-201ENST00000621854 213 ntBASIC1.44□□□□□ -2.18
USF1P22415 Z69720.2-201ENST00000624755 279 ntBASIC1.44□□□□□ -2.18
USF1P22415 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.43□□□□□ -2.18
USF1P22415 U8.3-201ENST00000363321 132 ntBASIC1.43□□□□□ -2.18
USF1P22415 RNU6-116P-201ENST00000384042 109 ntBASIC1.43□□□□□ -2.18
USF1P22415 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
USF1P22415 MIR544A-201ENST00000384855 91 ntBASIC1.43□□□□□ -2.18
USF1P22415 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.43□□□□□ -2.18
USF1P22415 AC009310.1-201ENST00000414414 451 ntBASIC1.43□□□□□ -2.18
USF1P22415 CYCSP33-201ENST00000414485 327 ntBASIC1.43□□□□□ -2.18
USF1P22415 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
USF1P22415 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.43□□□□□ -2.18
USF1P22415 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.43□□□□□ -2.18
USF1P22415 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.43□□□□□ -2.18
USF1P22415 AC092473.1-201ENST00000441098 221 ntBASIC1.43□□□□□ -2.18
USF1P22415 MTND1P30-201ENST00000441241 901 ntBASIC1.43□□□□□ -2.18
USF1P22415 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.43□□□□□ -2.18
USF1P22415 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.43□□□□□ -2.18
USF1P22415 AC087884.1-201ENST00000469738 328 ntBASIC1.43□□□□□ -2.18
USF1P22415 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.43□□□□□ -2.18
USF1P22415 AC106038.2-201ENST00000520706 568 ntBASIC1.43□□□□□ -2.18
USF1P22415 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.43□□□□□ -2.18
USF1P22415 AC009094.1-201ENST00000564443 426 ntBASIC1.43□□□□□ -2.18
USF1P22415 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.43□□□□□ -2.18
USF1P22415 AC090578.1-201ENST00000604955 591 ntBASIC1.43□□□□□ -2.18
USF1P22415 AC103810.8-201ENST00000607347 118 ntBASIC1.43□□□□□ -2.18
USF1P22415 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
USF1P22415 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms