Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU6-968P-201ENST00000384076 107 ntBASIC4.29□□□□□ -1.72
LIG1P18858 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.29□□□□□ -1.72
LIG1P18858 U3.37-201ENST00000408528 213 ntBASIC4.29□□□□□ -1.72
LIG1P18858 EIF1P2-201ENST00000428233 350 ntBASIC4.29□□□□□ -1.72
LIG1P18858 Z82210.1-201ENST00000440037 231 ntBASIC4.29□□□□□ -1.72
LIG1P18858 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.29□□□□□ -1.72
LIG1P18858 AC009237.8-201ENST00000445492 379 ntBASIC4.29□□□□□ -1.72
LIG1P18858 NDUFB4P10-201ENST00000452541 359 ntBASIC4.29□□□□□ -1.72
LIG1P18858 COX6CP14-201ENST00000469580 174 ntBASIC4.29□□□□□ -1.72
LIG1P18858 RNU6-711P-201ENST00000517255 106 ntBASIC4.29□□□□□ -1.72
LIG1P18858 AP002392.1-201ENST00000537692 208 ntBASIC4.29□□□□□ -1.72
LIG1P18858 MIR4782-201ENST00000577987 79 ntBASIC4.29□□□□□ -1.72
LIG1P18858 MIR4738-201ENST00000579134 87 ntBASIC4.29□□□□□ -1.72
LIG1P18858 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.29□□□□□ -1.72
LIG1P18858 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.29□□□□□ -1.72
LIG1P18858 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.29□□□□□ -1.72
LIG1P18858 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LIG1P18858 AC008568.2-201ENST00000623862 2313 ntBASIC4.29□□□□□ -1.72
LIG1P18858 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.29□□□□□ -1.72
LIG1P18858 ZNF826P-207ENST00000622273 1910 ntBASIC4.29□□□□□ -1.72
LIG1P18858 AC010733.2-201ENST00000589496 5702 ntBASIC4.28□□□□□ -1.72
LIG1P18858 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIG1P18858 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LIG1P18858 AC118273.1-201ENST00000525324 3006 ntBASIC4.28□□□□□ -1.72
LIG1P18858 RNU6-222P-201ENST00000362438 107 ntBASIC4.28□□□□□ -1.72
LIG1P18858 Y_RNA.44-201ENST00000362676 108 ntBASIC4.28□□□□□ -1.72
LIG1P18858 Y_RNA.76-201ENST00000362931 109 ntBASIC4.28□□□□□ -1.72
LIG1P18858 RNU6-326P-201ENST00000365480 107 ntBASIC4.28□□□□□ -1.72
LIG1P18858 RNU6-1286P-201ENST00000383871 107 ntBASIC4.28□□□□□ -1.72
LIG1P18858 RNU6-187P-201ENST00000384139 106 ntBASIC4.28□□□□□ -1.72
LIG1P18858 Y_RNA.504-201ENST00000384481 104 ntBASIC4.28□□□□□ -1.72
LIG1P18858 MIR554-201ENST00000384874 96 ntBASIC4.28□□□□□ -1.72
LIG1P18858 MTCO2P33-201ENST00000402100 465 ntBASIC4.28□□□□□ -1.72
LIG1P18858 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.28□□□□□ -1.72
LIG1P18858 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.28□□□□□ -1.72
LIG1P18858 CYCSP32-201ENST00000440548 321 ntBASIC4.28□□□□□ -1.72
LIG1P18858 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.28□□□□□ -1.72
LIG1P18858 AC107393.1-201ENST00000512403 346 ntBASIC4.28□□□□□ -1.72
LIG1P18858 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.28□□□□□ -1.72
LIG1P18858 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.28□□□□□ -1.72
LIG1P18858 SNORA43.2-201ENST00000516652 128 ntBASIC4.28□□□□□ -1.72
LIG1P18858 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.28□□□□□ -1.72
LIG1P18858 AC034105.4-201ENST00000568304 277 ntBASIC4.28□□□□□ -1.72
LIG1P18858 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.28□□□□□ -1.72
LIG1P18858 MIR3133-201ENST00000583157 78 ntBASIC4.28□□□□□ -1.72
LIG1P18858 AC099778.2-201ENST00000610904 211 ntBASIC4.28□□□□□ -1.72
LIG1P18858 AC011476.5-201ENST00000615594 130 ntBASIC4.28□□□□□ -1.72
LIG1P18858 U6.99-201ENST00000637524 83 ntBASIC4.28□□□□□ -1.72
LIG1P18858 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LIG1P18858 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LIG1P18858 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.27□□□□□ -1.73
LIG1P18858 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LIG1P18858 AL353746.1-201ENST00000566293 6881 ntBASIC4.27□□□□□ -1.73
LIG1P18858 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIG1P18858 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIG1P18858 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.27□□□□□ -1.73
LIG1P18858 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIG1P18858 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.27□□□□□ -1.73
LIG1P18858 RNU6-318P-201ENST00000384283 103 ntBASIC4.27□□□□□ -1.73
LIG1P18858 RNA5SP213-201ENST00000391031 106 ntBASIC4.27□□□□□ -1.73
LIG1P18858 RNU1-139P-201ENST00000391307 165 ntBASIC4.27□□□□□ -1.73
LIG1P18858 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.27□□□□□ -1.73
LIG1P18858 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.27□□□□□ -1.73
LIG1P18858 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.27□□□□□ -1.73
LIG1P18858 EIF1AXP1-201ENST00000419267 435 ntBASIC4.27□□□□□ -1.73
LIG1P18858 AC092047.1-201ENST00000424997 240 ntBASIC4.27□□□□□ -1.73
LIG1P18858 AL445584.1-201ENST00000431451 330 ntBASIC4.27□□□□□ -1.73
LIG1P18858 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.27□□□□□ -1.73
LIG1P18858 AC006026.2-201ENST00000457376 180 ntBASIC4.27□□□□□ -1.73
LIG1P18858 RN7SL542P-201ENST00000467147 294 ntBASIC4.27□□□□□ -1.73
LIG1P18858 RPL7P49-201ENST00000471402 708 ntBASIC4.27□□□□□ -1.73
LIG1P18858 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.27□□□□□ -1.73
LIG1P18858 RN7SKP272-201ENST00000516988 232 ntBASIC4.27□□□□□ -1.73
LIG1P18858 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.27□□□□□ -1.73
LIG1P18858 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.27□□□□□ -1.73
LIG1P18858 CYCSP39-201ENST00000565821 309 ntBASIC4.27□□□□□ -1.73
LIG1P18858 Z83818.1-201ENST00000603584 150 ntBASIC4.27□□□□□ -1.73
LIG1P18858 SNORD113-5-201ENST00000607261 78 ntBASIC4.27□□□□□ -1.73
LIG1P18858 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.27□□□□□ -1.73
LIG1P18858 SNORA50A-202ENST00000629536 136 ntBASIC4.27□□□□□ -1.73
LIG1P18858 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LIG1P18858 AC241585.2-209ENST00000638217 143 ntBASIC4.27□□□□□ -1.73
LIG1P18858 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIG1P18858 MAPK10-373ENST00000641983 6772 ntBASIC4.27□□□□□ -1.73
LIG1P18858 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.26□□□□□ -1.73
LIG1P18858 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LIG1P18858 RNU6-527P-201ENST00000363425 104 ntBASIC4.26□□□□□ -1.73
LIG1P18858 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LIG1P18858 SNORA53-201ENST00000391141 249 ntBASIC4.26□□□□□ -1.73
LIG1P18858 MIR548I2-201ENST00000408348 149 ntBASIC4.26□□□□□ -1.73
LIG1P18858 RN7SKP156-201ENST00000410308 342 ntBASIC4.26□□□□□ -1.73
LIG1P18858 RN7SKP53-201ENST00000411337 315 ntBASIC4.26□□□□□ -1.73
LIG1P18858 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.26□□□□□ -1.73
LIG1P18858 AC005002.2-201ENST00000438228 269 ntBASIC4.26□□□□□ -1.73
LIG1P18858 RPS15AP7-201ENST00000439294 405 ntBASIC4.26□□□□□ -1.73
LIG1P18858 AL353705.4-201ENST00000449661 238 ntBASIC4.26□□□□□ -1.73
LIG1P18858 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.26□□□□□ -1.73
LIG1P18858 Y_RNA.683-201ENST00000516508 93 ntBASIC4.26□□□□□ -1.73
LIG1P18858 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.26□□□□□ -1.73
LIG1P18858 AP004607.1-201ENST00000524456 203 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms