Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ITGA4P13612 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ITGA4P13612 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ITGA4P13612 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ITGA4P13612 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ITGA4P13612 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 RNU6-1301P-201ENST00000362724 104 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 RNU6-1203P-201ENST00000410703 110 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.87□□□□□ -1.79
ITGA4P13612 AC139712.2-201ENST00000424302 339 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 RPL23AP95-201ENST00000426806 265 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.87□□□□□ -1.79
ITGA4P13612 AC087477.1-201ENST00000465747 340 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 RPS26P21-201ENST00000475397 348 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 HMGB1P35-201ENST00000503360 598 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 Y_RNA.713-201ENST00000517013 96 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 IGKV2-23-201ENST00000518729 323 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AC007375.1-201ENST00000554513 578 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AL391261.3-201ENST00000557194 520 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.87□□□□□ -1.79
ITGA4P13612 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.87□□□□□ -1.79
ITGA4P13612 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.87□□□□□ -1.79
ITGA4P13612 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.87□□□□□ -1.79
ITGA4P13612 MIR4300-201ENST00000581016 96 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.87□□□□□ -1.79
ITGA4P13612 RMST_6.1-201ENST00000611980 203 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AP001282.2-201ENST00000616149 309 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AC141273.2-201ENST00000618989 130 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AC073308.1-201ENST00000623696 305 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 AC091903.1-201ENST00000624322 454 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 SNORA43.4-201ENST00000629559 138 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.87□□□□□ -1.79
ITGA4P13612 CUL1P1-201ENST00000509510 2425 ntBASIC3.87□□□□□ -1.79
ITGA4P13612 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ITGA4P13612 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ITGA4P13612 Y_RNA.143-201ENST00000363520 106 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 SNORD115-32-201ENST00000364079 82 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 SNORA29-201ENST00000384183 140 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 SNORD78.2-201ENST00000391076 69 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 PTMAP5-201ENST00000393073 333 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.86□□□□□ -1.79
ITGA4P13612 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.86□□□□□ -1.79
ITGA4P13612 HMGN2P10-201ENST00000448085 265 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 RPL21P10-201ENST00000463521 490 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AC025518.1-201ENST00000479856 347 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AC097462.2-201ENST00000504623 481 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AC026784.1-201ENST00000507986 352 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 RNU1-61P-201ENST00000516107 151 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 NACAP3-201ENST00000552100 481 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AL161756.2-201ENST00000604597 246 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AC240442.1-201ENST00000616055 283 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
ITGA4P13612 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.86□□□□□ -1.79
ITGA4P13612 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ITGA4P13612 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ITGA4P13612 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ITGA4P13612 ADAM3A-203ENST00000461344 2157 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ITGA4P13612 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ITGA4P13612 snoU2_19.2-201ENST00000363024 80 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 RNA5SP42-201ENST00000364278 115 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.85□□□□□ -1.79
ITGA4P13612 MIR544A-201ENST00000384855 91 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 MIR23A-201ENST00000385245 73 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 SNORD115-46-201ENST00000390982 71 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 RPS4XP3-201ENST00000398541 413 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 UBA52P6-201ENST00000399822 382 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 AL079342.1-201ENST00000401460 267 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 HSPE1P26-201ENST00000405341 275 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.85□□□□□ -1.79
ITGA4P13612 BPY2DP-201ENST00000422208 265 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 AC096920.1-201ENST00000423991 241 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.85□□□□□ -1.79
ITGA4P13612 RPL23AP83-201ENST00000434984 473 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.85□□□□□ -1.79
ITGA4P13612 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.85□□□□□ -1.79
ITGA4P13612 AP000870.1-201ENST00000472927 406 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 MED28P2-201ENST00000475771 317 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.85□□□□□ -1.79
ITGA4P13612 RNU6-1012P-201ENST00000516606 109 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 SNORA31.23-201ENST00000517219 133 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.85□□□□□ -1.79
ITGA4P13612 Y_RNA.772-201ENST00000606692 102 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.85□□□□□ -1.79
ITGA4P13612 AC011476.5-201ENST00000615594 130 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.85□□□□□ -1.79
ITGA4P13612 CEP170P1-201ENST00000502249 4587 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.85□□□□□ -1.79
ITGA4P13612 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ITGA4P13612 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ITGA4P13612 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
ITGA4P13612 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ITGA4P13612 AL353743.1-202ENST00000431724 1695 ntBASIC3.84□□□□□ -1.79
ITGA4P13612 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ITGA4P13612 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ITGA4P13612 ZNF826P-207ENST00000622273 1910 ntBASIC3.84□□□□□ -1.79
ITGA4P13612 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms