Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC017083.3-201ENST00000609955 700 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.02□□□□□ -2.41
COL6A3P12111 AC009033.1-201ENST00000624279 431 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 SNORD1A-201ENST00000364968 72 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 Y_RNA.436-201ENST00000384097 102 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 MIR597-201ENST00000384968 97 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AL603865.2-201ENST00000401679 213 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.02□□□□□ -2.41
COL6A3P12111 FABP5P14-201ENST00000437273 393 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.02□□□□□ -2.41
COL6A3P12111 AC112492.4-201ENST00000456549 352 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.02□□□□□ -2.41
COL6A3P12111 AC074344.1-201ENST00000512823 224 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 SNORA68.3-201ENST00000515906 83 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 RN7SKP12-201ENST00000516275 143 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AC233702.2-202ENST00000562547 291 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AC136619.2-201ENST00000563361 631 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.02□□□□□ -2.41
COL6A3P12111 AC008088.1-201ENST00000580993 280 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 MIR548AZ-201ENST00000616567 95 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 AC040168.1-201ENST00000623594 991 ntBASIC0.02□□□□□ -2.41
COL6A3P12111 RNU6-374P-201ENST00000364146 108 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 SNORD82-201ENST00000365530 70 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 RNU6-1151P-201ENST00000384684 107 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 AL353813.1-201ENST00000440700 253 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 RAC1P7-201ENST00000445367 377 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.01□□□□□ -2.41
COL6A3P12111 SNORA31.4-201ENST00000516049 129 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 RN7SKP164-201ENST00000516138 266 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 RNU6-1282P-201ENST00000516735 96 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 RNU6-1308P-201ENST00000516817 103 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.01□□□□□ -2.41
COL6A3P12111 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.01□□□□□ -2.41
COL6A3P12111 AC090578.1-201ENST00000604955 591 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
COL6A3P12111 AL158163.2-201ENST00000619110 700 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 MIR302D-201ENST00000362275 68 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 Y_RNA.62-201ENST00000362840 99 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 Y_RNA.150-201ENST00000363562 102 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 RNU6-1065P-201ENST00000384513 106 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 MIR518A1-201ENST00000385068 85 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 RNA5SP109-201ENST00000391010 116 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 PNRC2P1-201ENST00000423940 420 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.01□□□□□ -2.41
COL6A3P12111 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.01□□□□□ -2.41
COL6A3P12111 AL136520.1-202ENST00000555494 763 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 BNIP3P23-201ENST00000599655 511 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 BBIP1P1-201ENST00000602999 279 ntBASIC0.01□□□□□ -2.41
COL6A3P12111 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.01□□□□□ -2.41
COL6A3P12111 AC090625.1-201ENST00000357130 210 ntBASIC0□□□□□ -2.41
COL6A3P12111 SNORA25B-201ENST00000365507 128 ntBASIC0□□□□□ -2.41
COL6A3P12111 RNU6-730P-201ENST00000383954 104 ntBASIC0□□□□□ -2.41
COL6A3P12111 RNA5SP219-201ENST00000390940 113 ntBASIC0□□□□□ -2.41
COL6A3P12111 RPS27P16-201ENST00000425758 201 ntBASIC0□□□□□ -2.41
COL6A3P12111 YWHAZP8-201ENST00000436935 731 ntBASIC0□□□□□ -2.41
COL6A3P12111 AC023194.1-201ENST00000493084 308 ntBASIC0□□□□□ -2.41
COL6A3P12111 AC105758.1-201ENST00000506038 399 ntBASIC0□□□□□ -2.41
COL6A3P12111 TRAPPC2P7-201ENST00000509650 231 ntBASIC0□□□□□ -2.41
COL6A3P12111 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0□□□□□ -2.41
COL6A3P12111 AC021739.1-201ENST00000559631 174 ntBASIC0□□□□□ -2.41
COL6A3P12111 AC024257.5-201ENST00000612739 531 ntBASIC0□□□□□ -2.41
COL6A3P12111 uc_338.15-201ENST00000615470 191 ntBASIC0□□□□□ -2.41
COL6A3P12111 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0□□□□□ -2.41
COL6A3P12111 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
COL6A3P12111 RPL26P27-201ENST00000414397 437 ntBASIC0□□□□□ -2.41
COL6A3P12111 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0□□□□□ -2.41
COL6A3P12111 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0□□□□□ -2.41
COL6A3P12111 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0□□□□□ -2.41
COL6A3P12111 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0□□□□□ -2.41
COL6A3P12111 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0□□□□□ -2.41
COL6A3P12111 RNA5SP168-201ENST00000516642 112 ntBASIC0□□□□□ -2.41
COL6A3P12111 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0□□□□□ -2.41
COL6A3P12111 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0□□□□□ -2.41
COL6A3P12111 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0□□□□□ -2.41
COL6A3P12111 AC098614.4-201ENST00000607601 462 ntBASIC0□□□□□ -2.41
COL6A3P12111 AP005229.2-201ENST00000609980 697 ntBASIC0□□□□□ -2.41
COL6A3P12111 AC092106.3-201ENST00000611308 722 ntBASIC0□□□□□ -2.41
COL6A3P12111 MIR6134-201ENST00000617606 109 ntBASIC0□□□□□ -2.41
COL6A3P12111 MIR4315-1-201ENST00000636800 73 ntBASIC0□□□□□ -2.41
COL6A3P12111 MIR4315-2-201ENST00000640925 73 ntBASIC0□□□□□ -2.41
COL6A3P12111 RNU5A-1-201ENST00000362698 116 ntBASIC-0□□□□□ -2.41
COL6A3P12111 MIR942-201ENST00000401111 86 ntBASIC-0□□□□□ -2.41
COL6A3P12111 SNORD99-201ENST00000408612 74 ntBASIC-0□□□□□ -2.41
COL6A3P12111 MIR1283-2-201ENST00000408621 87 ntBASIC-0□□□□□ -2.41
COL6A3P12111 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0□□□□□ -2.41
COL6A3P12111 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0□□□□□ -2.41
COL6A3P12111 AL669831.1-202ENST00000428504 417 ntBASIC-0□□□□□ -2.41
COL6A3P12111 MTCO3P5-201ENST00000433620 714 ntBASIC-0□□□□□ -2.41
COL6A3P12111 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0□□□□□ -2.41
COL6A3P12111 AC023512.1-201ENST00000444513 499 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0□□□□□ -2.41
COL6A3P12111 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-0□□□□□ -2.41
COL6A3P12111 AL049874.1-201ENST00000489560 388 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0□□□□□ -2.41
COL6A3P12111 AC006199.1-201ENST00000548728 219 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AC090079.2-201ENST00000575289 768 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0□□□□□ -2.41
COL6A3P12111 AC025588.3-201ENST00000604182 274 ntBASIC-0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms