Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR98-201ENST00000606724 119 ntBASIC1.24□□□□□ -2.21
COL11A1P12107 AL359547.2-201ENST00000615810 418 ntBASIC1.24□□□□□ -2.21
COL11A1P12107 AL603839.4-201ENST00000624658 1005 ntBASIC1.24□□□□□ -2.21
COL11A1P12107 AC099654.13-201ENST00000639774 207 ntBASIC1.24□□□□□ -2.21
COL11A1P12107 RBBP8P1-201ENST00000449447 1844 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL11A1P12107 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL11A1P12107 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL11A1P12107 RNY1P12-201ENST00000364251 105 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AC068050.1-201ENST00000394891 380 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.23□□□□□ -2.21
COL11A1P12107 MTND1P27-201ENST00000451117 902 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 MTCO2P29-201ENST00000465212 189 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.23□□□□□ -2.21
COL11A1P12107 Y_RNA.672-201ENST00000516289 104 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 RNU6-840P-201ENST00000517275 65 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AP005597.4-201ENST00000526762 229 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.23□□□□□ -2.21
COL11A1P12107 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.23□□□□□ -2.21
COL11A1P12107 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.23□□□□□ -2.21
COL11A1P12107 ZNF519P3-201ENST00000557158 1032 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.23□□□□□ -2.21
COL11A1P12107 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.23□□□□□ -2.21
COL11A1P12107 AC073544.2-201ENST00000601155 540 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AC025165.5-201ENST00000602802 578 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.23□□□□□ -2.21
COL11A1P12107 AC245014.2-201ENST00000603689 287 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 BNIP3P9-201ENST00000603714 553 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AC246785.4-201ENST00000605374 287 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AC008945.2-201ENST00000606056 604 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 RN7SKP299-201ENST00000606679 301 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 AC092140.2-201ENST00000618027 521 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 FRG1KP-201ENST00000623592 341 ntBASIC1.23□□□□□ -2.21
COL11A1P12107 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL11A1P12107 RNU1-72P-201ENST00000362976 153 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNY4P34-201ENST00000364779 95 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU6-61P-201ENST00000365528 109 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU6-946P-201ENST00000383878 107 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU1-39P-201ENST00000383897 165 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU6-1029P-201ENST00000384109 107 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AL139397.2-201ENST00000404529 772 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC114491.1-201ENST00000416095 246 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC096649.2-201ENST00000416186 393 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 ELOCP14-201ENST00000428070 331 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC005534.2-201ENST00000431047 433 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 MTND1P28-201ENST00000435623 950 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RPS24P1-201ENST00000438550 371 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 ELOCP7-201ENST00000439968 331 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.22□□□□□ -2.21
COL11A1P12107 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.22□□□□□ -2.21
COL11A1P12107 MTND1P12-201ENST00000455231 147 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC091965.2-201ENST00000512324 613 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 SNORA31.3-201ENST00000516029 96 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU7-51P-201ENST00000516560 62 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 Y_RNA.695-201ENST00000516715 107 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 SNORA18.6-201ENST00000516792 115 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC087854.1-201ENST00000519706 414 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 AL359212.1-201ENST00000556608 614 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 MIR4714-201ENST00000580728 77 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RN7SL793P-201ENST00000583259 296 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC092354.1-201ENST00000606057 376 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AL365204.3-201ENST00000612448 685 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC068792.1-201ENST00000621354 417 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC110491.1-201ENST00000562191 2010 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 MIR373-201ENST00000362273 69 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU6-511P-201ENST00000363496 107 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU6-1083P-201ENST00000384022 107 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AL359634.1-202ENST00000404721 284 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RN7SKP142-201ENST00000411236 328 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC098831.1-201ENST00000440661 216 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 DDX3P2-201ENST00000446138 111 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 MTND2P24-201ENST00000453434 806 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.22□□□□□ -2.21
COL11A1P12107 KLF3P2-201ENST00000465138 268 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COL11A1P12107 MTCO3P7-201ENST00000510008 774 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU6-390P-201ENST00000516259 103 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 RNU6-1092P-201ENST00000516955 87 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 AC011979.2-201ENST00000527568 352 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 AL133241.1-201ENST00000556832 487 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 MTCYBP33-201ENST00000575007 1130 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms