Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CUL1P1-201ENST00000509510 2425 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-222P-201ENST00000362438 107 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-227P-201ENST00000362865 103 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.123-201ENST00000363338 102 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-926P-201ENST00000384075 107 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-959P-201ENST00000384671 107 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 MIR634-201ENST00000385208 97 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.590-201ENST00000410140 107 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 BMS1P22-201ENST00000414726 313 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 RPL32P34-201ENST00000486380 400 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 AC010265.1-201ENST00000513509 211 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.679-201ENST00000516416 91 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 SNORA43.2-201ENST00000516652 128 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 AC069240.1-201ENST00000548774 375 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 AC027288.2-201ENST00000553028 243 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 MIR3651-201ENST00000630427 90 ntBASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.02□□□□□ -1.61
CSB-PGBD3P0DP91 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.275-201ENST00000364726 110 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 SNORA22C-201ENST00000384614 134 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-1154P-201ENST00000391001 104 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 RNU2-61P-201ENST00000411069 191 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AC005002.2-201ENST00000438228 269 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.638-201ENST00000459374 113 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AP001324.2-201ENST00000461163 319 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 RPL23AP49-201ENST00000492925 468 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AC011602.1-201ENST00000546484 331 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AC024153.1-201ENST00000603103 365 ntBASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CSB-PGBD3P0DP91 AC068254.2-201ENST00000623938 3577 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-527P-201ENST00000363425 104 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-105P-201ENST00000363909 104 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.418-201ENST00000384029 102 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 AL591034.1-201ENST00000407447 340 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 AC069285.2-201ENST00000440210 275 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 AC124916.1-201ENST00000444020 547 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 SNORD105B-201ENST00000458770 79 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 GNRHR2P1-201ENST00000555315 631 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 AC060766.3-201ENST00000591442 263 ntBASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CSB-PGBD3P0DP91 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-318P-201ENST00000384283 103 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.569-201ENST00000384749 103 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 HDGFP1-201ENST00000405943 252 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 NDUFS5P4-201ENST00000412983 318 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 AL031659.1-201ENST00000447075 539 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 SNORA59A-201ENST00000459326 152 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RN7SL601P-201ENST00000471221 293 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 AC006445.2-201ENST00000510061 472 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-313P-201ENST00000516317 112 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-62P-201ENST00000516526 102 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RN7SKP57-201ENST00000517248 293 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 AC020895.1-201ENST00000595362 272 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 SNORA62.6-201ENST00000606322 83 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 SNORD113-5-201ENST00000607261 78 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 AC108706.1-201ENST00000611053 297 ntBASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RBBP8P1-201ENST00000449447 1844 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms