Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR548B-201ENST00000385247 97 ntBASIC1.16□□□□□ -2.22
TPM1P09493 SNORA12-201ENST00000391162 147 ntBASIC1.16□□□□□ -2.22
TPM1P09493 RPS20P2-201ENST00000402520 389 ntBASIC1.16□□□□□ -2.22
TPM1P09493 AL161935.2-201ENST00000414627 60 ntBASIC1.16□□□□□ -2.22
TPM1P09493 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.16□□□□□ -2.22
TPM1P09493 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.16□□□□□ -2.22
TPM1P09493 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.16□□□□□ -2.22
TPM1P09493 SNORD60.2-201ENST00000516883 86 ntBASIC1.16□□□□□ -2.22
TPM1P09493 RNA5SP437-201ENST00000517249 129 ntBASIC1.16□□□□□ -2.22
TPM1P09493 ADI1P3-201ENST00000549509 470 ntBASIC1.16□□□□□ -2.22
TPM1P09493 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.16□□□□□ -2.22
TPM1P09493 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
TPM1P09493 AC090578.1-201ENST00000604955 591 ntBASIC1.16□□□□□ -2.22
TPM1P09493 AC080013.3-201ENST00000606839 578 ntBASIC1.16□□□□□ -2.22
TPM1P09493 AP002782.1-201ENST00000623107 614 ntBASIC1.16□□□□□ -2.22
TPM1P09493 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TPM1P09493 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.15□□□□□ -2.22
TPM1P09493 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
TPM1P09493 RNU4-15P-201ENST00000362613 141 ntBASIC1.15□□□□□ -2.23
TPM1P09493 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
TPM1P09493 RNU2-7P-201ENST00000410794 178 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AL031779.1-201ENST00000415663 330 ntBASIC1.15□□□□□ -2.23
TPM1P09493 RPL22P18-201ENST00000417197 377 ntBASIC1.15□□□□□ -2.23
TPM1P09493 MTND1P32-201ENST00000433043 938 ntBASIC1.15□□□□□ -2.23
TPM1P09493 MTND3P1-201ENST00000441336 220 ntBASIC1.15□□□□□ -2.23
TPM1P09493 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.15□□□□□ -2.23
TPM1P09493 MTND1P12-201ENST00000455231 147 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
TPM1P09493 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.15□□□□□ -2.23
TPM1P09493 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AC112187.2-201ENST00000604345 283 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AC069114.2-201ENST00000604699 304 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AC121334.2-201ENST00000605387 271 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AP002360.4-201ENST00000606980 481 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AC012409.4-201ENST00000612923 249 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
TPM1P09493 AC131159.1-201ENST00000621854 213 ntBASIC1.15□□□□□ -2.23
TPM1P09493 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
TPM1P09493 AC073343.1-201ENST00000328239 651 ntBASIC1.14□□□□□ -2.23
TPM1P09493 MIR544A-201ENST00000384855 91 ntBASIC1.14□□□□□ -2.23
TPM1P09493 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.14□□□□□ -2.23
TPM1P09493 DYNLT3P2-201ENST00000442517 295 ntBASIC1.14□□□□□ -2.23
TPM1P09493 MTND5P2-201ENST00000442927 1142 ntBASIC1.14□□□□□ -2.23
TPM1P09493 ART2BP-201ENST00000453501 499 ntBASIC1.14□□□□□ -2.23
TPM1P09493 AC145146.1-201ENST00000496370 254 ntBASIC1.14□□□□□ -2.23
TPM1P09493 RNA5SP481-201ENST00000516814 122 ntBASIC1.14□□□□□ -2.23
TPM1P09493 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TPM1P09493 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.14□□□□□ -2.23
TPM1P09493 AL034555.1-201ENST00000604816 211 ntBASIC1.14□□□□□ -2.23
TPM1P09493 AL139022.2-201ENST00000606934 443 ntBASIC1.14□□□□□ -2.23
TPM1P09493 AL138955.1-201ENST00000622881 1040 ntBASIC1.14□□□□□ -2.23
TPM1P09493 AC010615.1-201ENST00000594254 1764 ntBASIC1.13□□□□□ -2.23
TPM1P09493 RNU6-1285P-201ENST00000363480 105 ntBASIC1.13□□□□□ -2.23
TPM1P09493 MTCO3P41-201ENST00000414801 328 ntBASIC1.13□□□□□ -2.23
TPM1P09493 RPS15AP12-201ENST00000419498 388 ntBASIC1.13□□□□□ -2.23
TPM1P09493 AL591043.1-201ENST00000432461 424 ntBASIC1.13□□□□□ -2.23
TPM1P09493 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
TPM1P09493 AL360271.2-201ENST00000447710 161 ntBASIC1.13□□□□□ -2.23
TPM1P09493 AC022447.4-201ENST00000504053 364 ntBASIC1.13□□□□□ -2.23
TPM1P09493 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.13□□□□□ -2.23
TPM1P09493 RNU5A-4P-201ENST00000516588 111 ntBASIC1.13□□□□□ -2.23
TPM1P09493 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.13□□□□□ -2.23
TPM1P09493 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.13□□□□□ -2.23
TPM1P09493 RNU6-1187P-201ENST00000364771 110 ntBASIC1.12□□□□□ -2.23
TPM1P09493 RPL23AP36-201ENST00000413895 458 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.12□□□□□ -2.23
TPM1P09493 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.12□□□□□ -2.23
TPM1P09493 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.12□□□□□ -2.23
TPM1P09493 AC104982.1-201ENST00000478775 574 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.12□□□□□ -2.23
TPM1P09493 AC079140.3-201ENST00000511111 550 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.12□□□□□ -2.23
TPM1P09493 RNU1-86P-201ENST00000516108 154 ntBASIC1.12□□□□□ -2.23
TPM1P09493 RNU6-123P-201ENST00000516163 102 ntBASIC1.12□□□□□ -2.23
TPM1P09493 RNU1-107P-201ENST00000516617 154 ntBASIC1.12□□□□□ -2.23
TPM1P09493 CENPUP1-201ENST00000526649 1202 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.12□□□□□ -2.23
TPM1P09493 MIR3945-201ENST00000581853 98 ntBASIC1.12□□□□□ -2.23
TPM1P09493 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.12□□□□□ -2.23
TPM1P09493 MIR8065-201ENST00000620577 100 ntBASIC1.12□□□□□ -2.23
TPM1P09493 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AC009033.1-201ENST00000624279 431 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AC099654.5-201ENST00000636479 350 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AC103706.2-201ENST00000638080 240 ntBASIC1.12□□□□□ -2.23
TPM1P09493 AC241585.2-209ENST00000638217 143 ntBASIC1.12□□□□□ -2.23
TPM1P09493 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.12□□□□□ -2.23
TPM1P09493 MTND4P16-201ENST00000466108 1367 ntBASIC1.11□□□□□ -2.23
TPM1P09493 RNU5E-10P-201ENST00000363506 118 ntBASIC1.11□□□□□ -2.23
TPM1P09493 RNU5E-7P-201ENST00000365290 117 ntBASIC1.11□□□□□ -2.23
TPM1P09493 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.11□□□□□ -2.23
TPM1P09493 AC099677.2-201ENST00000436385 175 ntBASIC1.11□□□□□ -2.23
TPM1P09493 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.11□□□□□ -2.23
TPM1P09493 SNRPEP8-201ENST00000442866 260 ntBASIC1.11□□□□□ -2.23
TPM1P09493 AC010095.1-201ENST00000443543 144 ntBASIC1.11□□□□□ -2.23
TPM1P09493 RNU7-95P-201ENST00000459222 64 ntBASIC1.11□□□□□ -2.23
TPM1P09493 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
TPM1P09493 MTND3P5-201ENST00000512798 333 ntBASIC1.11□□□□□ -2.23
TPM1P09493 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.11□□□□□ -2.23
TPM1P09493 MTND2P7-201ENST00000521337 640 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms