Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 UBL5P3-201ENST00000475112 231 ntBASIC2.89□□□□□ -1.95
MMP3P08254 ANXA2P1-201ENST00000505539 926 ntBASIC2.89□□□□□ -1.95
MMP3P08254 AC113155.1-201ENST00000511141 769 ntBASIC2.89□□□□□ -1.95
MMP3P08254 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.89□□□□□ -1.95
MMP3P08254 SNORD53-201ENST00000579969 78 ntBASIC2.89□□□□□ -1.95
MMP3P08254 AC078899.3-201ENST00000599065 212 ntBASIC2.89□□□□□ -1.95
MMP3P08254 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.89□□□□□ -1.95
MMP3P08254 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
MMP3P08254 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MMP3P08254 RNU6-1059P-201ENST00000363752 98 ntBASIC2.88□□□□□ -1.95
MMP3P08254 RNU5E-7P-201ENST00000365290 117 ntBASIC2.88□□□□□ -1.95
MMP3P08254 Y_RNA.387-201ENST00000383918 102 ntBASIC2.88□□□□□ -1.95
MMP3P08254 RNU6-601P-201ENST00000384540 107 ntBASIC2.88□□□□□ -1.95
MMP3P08254 MIR518C-201ENST00000384822 101 ntBASIC2.88□□□□□ -1.95
MMP3P08254 MIR27B-201ENST00000385129 97 ntBASIC2.88□□□□□ -1.95
MMP3P08254 U3.37-201ENST00000408528 213 ntBASIC2.88□□□□□ -1.95
MMP3P08254 AC023141.4-201ENST00000412031 328 ntBASIC2.88□□□□□ -1.95
MMP3P08254 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.88□□□□□ -1.95
MMP3P08254 Z82205.1-201ENST00000428456 297 ntBASIC2.88□□□□□ -1.95
MMP3P08254 SNAP23P1-201ENST00000433229 246 ntBASIC2.88□□□□□ -1.95
MMP3P08254 FABP5P14-201ENST00000437273 393 ntBASIC2.88□□□□□ -1.95
MMP3P08254 RNU6-1153P-201ENST00000516760 105 ntBASIC2.88□□□□□ -1.95
MMP3P08254 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.88□□□□□ -1.95
MMP3P08254 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.88□□□□□ -1.95
MMP3P08254 APOOP3-201ENST00000536787 586 ntBASIC2.88□□□□□ -1.95
MMP3P08254 TRAV32-201ENST00000553993 340 ntBASIC2.88□□□□□ -1.95
MMP3P08254 AL121821.2-201ENST00000556081 394 ntBASIC2.88□□□□□ -1.95
MMP3P08254 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.88□□□□□ -1.95
MMP3P08254 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.88□□□□□ -1.95
MMP3P08254 AL050343.2-201ENST00000607338 280 ntBASIC2.88□□□□□ -1.95
MMP3P08254 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.88□□□□□ -1.95
MMP3P08254 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
MMP3P08254 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
MMP3P08254 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.87□□□□□ -1.95
MMP3P08254 RNU6-858P-201ENST00000362436 107 ntBASIC2.87□□□□□ -1.95
MMP3P08254 Y_RNA.259-201ENST00000364619 101 ntBASIC2.87□□□□□ -1.95
MMP3P08254 RNU1-100P-201ENST00000365255 165 ntBASIC2.87□□□□□ -1.95
MMP3P08254 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MMP3P08254 SNORD116-29-201ENST00000384516 83 ntBASIC2.87□□□□□ -1.95
MMP3P08254 AL117339.3-201ENST00000418733 162 ntBASIC2.87□□□□□ -1.95
MMP3P08254 RPS15AP5-201ENST00000436276 388 ntBASIC2.87□□□□□ -1.95
MMP3P08254 AC011816.1-201ENST00000441346 546 ntBASIC2.87□□□□□ -1.95
MMP3P08254 HMGN2P10-201ENST00000448085 265 ntBASIC2.87□□□□□ -1.95
MMP3P08254 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MMP3P08254 AC079140.5-201ENST00000507882 310 ntBASIC2.87□□□□□ -1.95
MMP3P08254 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.87□□□□□ -1.95
MMP3P08254 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MMP3P08254 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
MMP3P08254 AC006199.1-201ENST00000548728 219 ntBASIC2.87□□□□□ -1.95
MMP3P08254 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
MMP3P08254 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.87□□□□□ -1.95
MMP3P08254 AC100830.2-201ENST00000581636 240 ntBASIC2.87□□□□□ -1.95
MMP3P08254 AC009314.1-201ENST00000603871 304 ntBASIC2.87□□□□□ -1.95
MMP3P08254 AL161423.1-201ENST00000613700 262 ntBASIC2.87□□□□□ -1.95
MMP3P08254 AL138880.2-201ENST00000616214 239 ntBASIC2.87□□□□□ -1.95
MMP3P08254 MIR6134-201ENST00000617606 109 ntBASIC2.87□□□□□ -1.95
MMP3P08254 AC244517.12-201ENST00000623581 663 ntBASIC2.87□□□□□ -1.95
MMP3P08254 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
MMP3P08254 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
MMP3P08254 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
MMP3P08254 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.87□□□□□ -1.95
MMP3P08254 AC110491.1-201ENST00000562191 2010 ntBASIC2.86□□□□□ -1.95
MMP3P08254 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MMP3P08254 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
MMP3P08254 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MMP3P08254 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MMP3P08254 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MMP3P08254 RNA5SP289-201ENST00000362332 137 ntBASIC2.86□□□□□ -1.95
MMP3P08254 U8.2-201ENST00000363156 134 ntBASIC2.86□□□□□ -1.95
MMP3P08254 RNU6-1317P-201ENST00000364582 104 ntBASIC2.86□□□□□ -1.95
MMP3P08254 RNU6-1297P-201ENST00000384415 104 ntBASIC2.86□□□□□ -1.95
MMP3P08254 FTH1P15-201ENST00000406984 280 ntBASIC2.86□□□□□ -1.95
MMP3P08254 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.86□□□□□ -1.95
MMP3P08254 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
MMP3P08254 RNU6-325P-201ENST00000411132 105 ntBASIC2.86□□□□□ -1.95
MMP3P08254 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.86□□□□□ -1.95
MMP3P08254 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.86□□□□□ -1.95
MMP3P08254 UBE2V1P4-201ENST00000425374 344 ntBASIC2.86□□□□□ -1.95
MMP3P08254 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MMP3P08254 HIGD1AP2-201ENST00000446367 280 ntBASIC2.86□□□□□ -1.95
MMP3P08254 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MMP3P08254 SNORD19B-201ENST00000459623 84 ntBASIC2.86□□□□□ -1.95
MMP3P08254 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.86□□□□□ -1.95
MMP3P08254 RN7SL283P-201ENST00000489055 303 ntBASIC2.86□□□□□ -1.95
MMP3P08254 AK3P2-201ENST00000507976 429 ntBASIC2.86□□□□□ -1.95
MMP3P08254 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.86□□□□□ -1.95
MMP3P08254 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.86□□□□□ -1.95
MMP3P08254 AC021739.1-201ENST00000559631 174 ntBASIC2.86□□□□□ -1.95
MMP3P08254 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.86□□□□□ -1.95
MMP3P08254 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.86□□□□□ -1.95
MMP3P08254 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.86□□□□□ -1.95
MMP3P08254 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.86□□□□□ -1.95
MMP3P08254 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.86□□□□□ -1.95
MMP3P08254 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.86□□□□□ -1.95
MMP3P08254 U4.3-201ENST00000621047 82 ntBASIC2.86□□□□□ -1.95
MMP3P08254 MIR7843-201ENST00000622274 79 ntBASIC2.86□□□□□ -1.95
MMP3P08254 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
MMP3P08254 MTND5P19-201ENST00000424872 1794 ntBASIC2.85□□□□□ -1.95
MMP3P08254 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
MMP3P08254 RNU6-942P-201ENST00000363002 107 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 318.3 ms