Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SNORA31.19-201ENST00000517079 126 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DOAP06340 MYL12BP1-201ENST00000569826 507 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 AC024153.1-201ENST00000603103 365 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 AC006023.1-201ENST00000603944 259 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 PRR13P7-201ENST00000605538 430 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 AC107871.2-201ENST00000612894 502 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 U2.1-201ENST00000618978 145 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOAP06340 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DOAP06340 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DOAP06340 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOAP06340 FTLP6-201ENST00000355274 422 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 RNU6-806P-201ENST00000365147 105 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 SNORA18.3-201ENST00000384122 132 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 RNU6-140P-201ENST00000384566 108 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 Y_RNA.577-201ENST00000384794 101 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 RNU2-68P-201ENST00000410878 191 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 AL117339.3-201ENST00000418733 162 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DOAP06340 RPL21P40-201ENST00000428586 483 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 NDUFB4P6-201ENST00000436819 366 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 Z82210.1-201ENST00000440037 231 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DOAP06340 HMGN2P7-201ENST00000456186 273 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 RNA5SP468-201ENST00000516782 93 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 AC040926.1-201ENST00000530195 238 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 AL161629.2-201ENST00000615347 275 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.44□□□□□ -1.86
HLA-DOAP06340 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DOAP06340 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DOAP06340 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HLA-DOAP06340 U3.6-201ENST00000363622 211 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 Y_RNA.307-201ENST00000365022 117 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 SNORD14.1-201ENST00000365609 90 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 RNU6-708P-201ENST00000384217 107 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 RNU6-166P-201ENST00000384371 107 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 RNU6-933P-201ENST00000384424 107 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 SNORA40C-201ENST00000391285 128 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 AC092047.1-201ENST00000424997 240 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 MTND3P9-201ENST00000429526 346 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 AC087499.2-201ENST00000432861 149 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 AL512844.2-201ENST00000433990 593 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 SNRPEP9-201ENST00000436794 238 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 RPL37P4-201ENST00000448908 268 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DOAP06340 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DOAP06340 RNU6-475P-201ENST00000516073 104 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 Y_RNA.715-201ENST00000517082 110 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DOAP06340 AC006600.1-201ENST00000572529 153 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DOAP06340 RPL12P50-201ENST00000603116 116 ntBASIC3.43□□□□□ -1.86
HLA-DOAP06340 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DOAP06340 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DOAP06340 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DOAP06340 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DOAP06340 FAM35BP-202ENST00000497389 3337 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DOAP06340 AC007390.2-201ENST00000606229 3803 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DOAP06340 RPL21P1-201ENST00000399532 476 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 MIR1252-201ENST00000408861 65 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 ELOCP20-201ENST00000422460 345 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 AC092798.1-201ENST00000458542 409 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 RNU6-1037P-201ENST00000459571 107 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 Y_RNA.668-201ENST00000516233 93 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 AC008121.1-201ENST00000603244 268 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 AL021879.1-201ENST00000611756 288 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.42□□□□□ -1.86
HLA-DOAP06340 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DOAP06340 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DOAP06340 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DOAP06340 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOAP06340 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOAP06340 RNU6-874P-201ENST00000362390 105 ntBASIC3.41□□□□□ -1.86
HLA-DOAP06340 SNORD50.1-201ENST00000362987 71 ntBASIC3.41□□□□□ -1.86
HLA-DOAP06340 RNU6-379P-201ENST00000363813 104 ntBASIC3.41□□□□□ -1.86
HLA-DOAP06340 RNU6-472P-201ENST00000384299 107 ntBASIC3.41□□□□□ -1.86
HLA-DOAP06340 AC092423.1-201ENST00000430165 186 ntBASIC3.41□□□□□ -1.86
HLA-DOAP06340 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DOAP06340 AC133134.1-201ENST00000466800 359 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms