Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.97□□□□□ -2.25
APOEP02649 Y_RNA.332-201ENST00000365271 113 ntBASIC0.97□□□□□ -2.25
APOEP02649 SNORA18.2-201ENST00000383865 132 ntBASIC0.97□□□□□ -2.25
APOEP02649 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
APOEP02649 AC069282.1-201ENST00000411911 526 ntBASIC0.97□□□□□ -2.25
APOEP02649 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.97□□□□□ -2.25
APOEP02649 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.97□□□□□ -2.25
APOEP02649 AC007327.1-201ENST00000447461 264 ntBASIC0.97□□□□□ -2.25
APOEP02649 RPS27AP8-201ENST00000452665 445 ntBASIC0.97□□□□□ -2.25
APOEP02649 RNA5SP269-201ENST00000459032 137 ntBASIC0.97□□□□□ -2.25
APOEP02649 RPL9P9-202ENST00000466501 579 ntBASIC0.97□□□□□ -2.25
APOEP02649 AC116353.3-201ENST00000511215 249 ntBASIC0.97□□□□□ -2.25
APOEP02649 RNA5SP437-201ENST00000517249 129 ntBASIC0.97□□□□□ -2.25
APOEP02649 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.97□□□□□ -2.25
APOEP02649 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.97□□□□□ -2.25
APOEP02649 HMGB1P33-201ENST00000563485 527 ntBASIC0.97□□□□□ -2.25
APOEP02649 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.97□□□□□ -2.25
APOEP02649 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.97□□□□□ -2.25
APOEP02649 AP003465.2-201ENST00000602571 373 ntBASIC0.97□□□□□ -2.25
APOEP02649 AL391001.1-201ENST00000602747 715 ntBASIC0.97□□□□□ -2.25
APOEP02649 AL138889.2-201ENST00000603883 242 ntBASIC0.97□□□□□ -2.25
APOEP02649 AC108747.1-201ENST00000609508 535 ntBASIC0.97□□□□□ -2.25
APOEP02649 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
APOEP02649 AL121895.2-201ENST00000619558 447 ntBASIC0.97□□□□□ -2.25
APOEP02649 AL356596.1-201ENST00000624230 379 ntBASIC0.97□□□□□ -2.25
APOEP02649 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
APOEP02649 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
APOEP02649 OR4G1P-203ENST00000641984 1631 ntBASIC0.97□□□□□ -2.25
APOEP02649 OR4G2P-201ENST00000328113 903 ntBASIC0.96□□□□□ -2.26
APOEP02649 MIR96-201ENST00000362288 78 ntBASIC0.96□□□□□ -2.26
APOEP02649 SNORD116-12-201ENST00000384468 92 ntBASIC0.96□□□□□ -2.26
APOEP02649 RNU6-360P-201ENST00000390944 104 ntBASIC0.96□□□□□ -2.26
APOEP02649 SNORA12-201ENST00000391162 147 ntBASIC0.96□□□□□ -2.26
APOEP02649 RPS3AP36-201ENST00000398190 775 ntBASIC0.96□□□□□ -2.26
APOEP02649 AL136310.1-201ENST00000404926 654 ntBASIC0.96□□□□□ -2.26
APOEP02649 BTF3L4P1-201ENST00000413813 468 ntBASIC0.96□□□□□ -2.26
APOEP02649 NDUFB1P2-201ENST00000449477 176 ntBASIC0.96□□□□□ -2.26
APOEP02649 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.96□□□□□ -2.26
APOEP02649 RNU1-131P-201ENST00000458943 161 ntBASIC0.96□□□□□ -2.26
APOEP02649 MTND2P33-201ENST00000506452 1031 ntBASIC0.96□□□□□ -2.26
APOEP02649 SNORA3.4-201ENST00000515969 96 ntBASIC0.96□□□□□ -2.26
APOEP02649 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
APOEP02649 AC013828.2-201ENST00000532487 235 ntBASIC0.96□□□□□ -2.26
APOEP02649 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
APOEP02649 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.96□□□□□ -2.26
APOEP02649 MIR3146-201ENST00000580367 79 ntBASIC0.96□□□□□ -2.26
APOEP02649 DEFB131E-202ENST00000602581 683 ntBASIC0.96□□□□□ -2.26
APOEP02649 AC068620.3-201ENST00000602749 560 ntBASIC0.96□□□□□ -2.26
APOEP02649 AC174048.1-201ENST00000603389 144 ntBASIC0.96□□□□□ -2.26
APOEP02649 AC090578.1-201ENST00000604955 591 ntBASIC0.96□□□□□ -2.26
APOEP02649 AC112220.3-201ENST00000605502 502 ntBASIC0.96□□□□□ -2.26
APOEP02649 RMST_4.1-201ENST00000616886 107 ntBASIC0.96□□□□□ -2.26
APOEP02649 FRG1KP-201ENST00000623592 341 ntBASIC0.96□□□□□ -2.26
APOEP02649 SCARNA4-202ENST00000625402 129 ntBASIC0.96□□□□□ -2.26
APOEP02649 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
APOEP02649 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
APOEP02649 MIR340-201ENST00000362125 95 ntBASIC0.95□□□□□ -2.26
APOEP02649 Y_RNA.110-201ENST00000363220 99 ntBASIC0.95□□□□□ -2.26
APOEP02649 MIR499A-201ENST00000384903 122 ntBASIC0.95□□□□□ -2.26
APOEP02649 AL590556.1-201ENST00000423231 483 ntBASIC0.95□□□□□ -2.26
APOEP02649 MTND1P18-201ENST00000448191 573 ntBASIC0.95□□□□□ -2.26
APOEP02649 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.95□□□□□ -2.26
APOEP02649 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.95□□□□□ -2.26
APOEP02649 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
APOEP02649 AC034244.1-201ENST00000507687 207 ntBASIC0.95□□□□□ -2.26
APOEP02649 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.95□□□□□ -2.26
APOEP02649 AC112198.4-201ENST00000515450 351 ntBASIC0.95□□□□□ -2.26
APOEP02649 RN7SKP265-201ENST00000516448 223 ntBASIC0.95□□□□□ -2.26
APOEP02649 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.95□□□□□ -2.26
APOEP02649 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.95□□□□□ -2.26
APOEP02649 RAB11AP2-201ENST00000545905 639 ntBASIC0.95□□□□□ -2.26
APOEP02649 AC091135.1-201ENST00000585943 307 ntBASIC0.95□□□□□ -2.26
APOEP02649 AC136443.5-201ENST00000603741 370 ntBASIC0.95□□□□□ -2.26
APOEP02649 AC004492.1-201ENST00000607036 742 ntBASIC0.95□□□□□ -2.26
APOEP02649 AC072039.2-201ENST00000608883 439 ntBASIC0.95□□□□□ -2.26
APOEP02649 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
APOEP02649 AC009033.1-201ENST00000624279 431 ntBASIC0.95□□□□□ -2.26
APOEP02649 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.94□□□□□ -2.26
APOEP02649 Y_RNA.191-201ENST00000363972 113 ntBASIC0.94□□□□□ -2.26
APOEP02649 RNU1-93P-201ENST00000364704 169 ntBASIC0.94□□□□□ -2.26
APOEP02649 RNU6-384P-201ENST00000364900 104 ntBASIC0.94□□□□□ -2.26
APOEP02649 RNU6-723P-201ENST00000383973 107 ntBASIC0.94□□□□□ -2.26
APOEP02649 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.94□□□□□ -2.26
APOEP02649 EIF1P1-201ENST00000421436 341 ntBASIC0.94□□□□□ -2.26
APOEP02649 RPL23AP30-201ENST00000432419 501 ntBASIC0.94□□□□□ -2.26
APOEP02649 AL008629.1-201ENST00000438615 184 ntBASIC0.94□□□□□ -2.26
APOEP02649 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.94□□□□□ -2.26
APOEP02649 SNORA19.3-201ENST00000516165 130 ntBASIC0.94□□□□□ -2.26
APOEP02649 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.94□□□□□ -2.26
APOEP02649 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.94□□□□□ -2.26
APOEP02649 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.94□□□□□ -2.26
APOEP02649 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.94□□□□□ -2.26
APOEP02649 AC015688.6-201ENST00000577737 104 ntBASIC0.94□□□□□ -2.26
APOEP02649 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.94□□□□□ -2.26
APOEP02649 VN1R107P-201ENST00000601784 209 ntBASIC0.94□□□□□ -2.26
APOEP02649 BNIP3P31-201ENST00000604515 566 ntBASIC0.94□□□□□ -2.26
APOEP02649 RNU6-88P-201ENST00000606801 100 ntBASIC0.94□□□□□ -2.26
APOEP02649 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
APOEP02649 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
APOEP02649 SNORD33-201ENST00000362761 85 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms