Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AP001893.2-201ENST00000526949 202 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC008015.1-201ENST00000555505 465 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC103987.3-201ENST00000582071 292 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC018889.1-201ENST00000605372 397 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AP000654.2-201ENST00000605633 586 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
TRBV12-3P01733 RMST_6.1-201ENST00000611980 203 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC122133.1-201ENST00000613964 233 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC008250.2-201ENST00000615261 205 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AC097372.5-201ENST00000623665 376 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 AL603839.4-201ENST00000624658 1005 ntBASIC1.33□□□□□ -2.2
TRBV12-3P01733 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRBV12-3P01733 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.33□□□□□ -2.2
TRBV12-3P01733 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRBV12-3P01733 CBX3P1-201ENST00000325243 554 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 RNU6-1285P-201ENST00000363480 105 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 RNU6-553P-201ENST00000364047 96 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 SNORD48-201ENST00000364953 64 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 RNU6-160P-201ENST00000384591 107 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 SNORA26.9-201ENST00000391322 122 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 VN1R36P-201ENST00000414936 291 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TRBV12-3P01733 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 AL591806.2-201ENST00000433122 173 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 KATNBL1P3-201ENST00000443475 909 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 AC007677.1-201ENST00000445757 515 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 AL035666.1-201ENST00000446195 348 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 AC079448.1-201ENST00000449377 373 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TRBV12-3P01733 MTCYBP1-201ENST00000454315 1119 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 AC022447.4-201ENST00000504053 364 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 AC008834.1-201ENST00000511612 175 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 RNU6-377P-201ENST00000515965 102 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 RNU6-1178P-201ENST00000516674 107 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 RNU6-250P-201ENST00000516958 103 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 AP005435.4-201ENST00000529514 284 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 ZNF321P-202ENST00000550843 495 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 HSBP1P1-201ENST00000555205 166 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 AC104581.2-201ENST00000572227 430 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 MIR3618-201ENST00000580330 88 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 AF246928.1-201ENST00000623768 87 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TRBV12-3P01733 AC233981.2-201ENST00000611524 1614 ntBASIC1.32□□□□□ -2.2
TRBV12-3P01733 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
TRBV12-3P01733 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-37P-201ENST00000362692 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-1097P-201ENST00000363586 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-11P-201ENST00000364234 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-108P-201ENST00000365558 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-25P-201ENST00000383873 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-1-201ENST00000383898 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-48P-201ENST00000384161 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-36P-201ENST00000384172 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-4P-201ENST00000384205 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-74P-201ENST00000384235 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-5P-201ENST00000384238 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-3P-201ENST00000384314 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-16P-201ENST00000384385 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-15P-201ENST00000384534 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-2-201ENST00000384627 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-29P-201ENST00000384637 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-9-201ENST00000384776 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU6-33P-201ENST00000384793 107 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 MIR454-201ENST00000390180 115 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 SNORA48.1-201ENST00000390879 135 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 AL357139.1-201ENST00000407792 426 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 HMGN1P14-201ENST00000412459 517 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 SNORD56-201ENST00000413522 71 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 AL358453.1-201ENST00000422522 250 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 ISCA1P6-201ENST00000427740 390 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC009961.2-201ENST00000435771 251 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC243964.1-201ENST00000441814 261 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 GAPDHP17-201ENST00000449858 1001 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 AL033528.1-201ENST00000453780 140 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 RNU7-182P-201ENST00000459009 62 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC132942.1-201ENST00000486753 483 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 MTND3P5-201ENST00000512798 333 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 SNORA44.1-201ENST00000517031 108 ntBASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.31□□□□□ -2.2
TRBV12-3P01733 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms