Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MTND5P5-201ENST00000503764 376 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC079140.5-201ENST00000507882 310 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 RNU6-581P-201ENST00000516214 105 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC109329.2-201ENST00000519658 482 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.48□□□□□ -2.01
CLPTM1O96005 AC026371.1-201ENST00000551867 419 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.48□□□□□ -2.01
CLPTM1O96005 EIF4BP1-201ENST00000554881 351 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AL121821.2-201ENST00000556081 394 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 LINC00933-203ENST00000559812 219 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 MYL12BP1-201ENST00000569826 507 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AL355375.2-201ENST00000574825 175 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.48□□□□□ -2.01
CLPTM1O96005 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CLPTM1O96005 AC009233.1-201ENST00000616477 371 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 MIR6134-201ENST00000617606 109 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC010378.1-201ENST00000619270 362 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLPTM1O96005 ADAM3A-203ENST00000461344 2157 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLPTM1O96005 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLPTM1O96005 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.47□□□□□ -2.01
CLPTM1O96005 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLPTM1O96005 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLPTM1O96005 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CLPTM1O96005 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLPTM1O96005 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 Y_RNA.58-201ENST00000362807 102 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNU6-78P-201ENST00000362897 107 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 Y_RNA.154-201ENST00000363624 102 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNY3P1-201ENST00000365085 102 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNU1-100P-201ENST00000365255 165 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNU5E-7P-201ENST00000365290 117 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 Y_RNA.339-201ENST00000365325 102 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNY3-201ENST00000365484 102 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNU6-827P-201ENST00000365553 106 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 SNORA18.3-201ENST00000384122 132 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 Y_RNA.490-201ENST00000384413 102 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNU6-95P-201ENST00000384697 107 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 MIR524-201ENST00000385242 87 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 MIR767-201ENST00000390228 109 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 U3.37-201ENST00000408528 213 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.47□□□□□ -2.01
CLPTM1O96005 AL358075.3-201ENST00000426289 226 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RPS15AP5-201ENST00000436276 388 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 HMGN2P10-201ENST00000448085 265 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 MTND1P17-201ENST00000448961 204 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 AC107399.1-201ENST00000451226 265 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 RNU7-187P-201ENST00000458985 68 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.47□□□□□ -2.01
CLPTM1O96005 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.47□□□□□ -2.01
CLPTM1O96005 MTCO1P29-201ENST00000496868 288 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 FGF7P4-201ENST00000509595 295 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 HMGB3P3-201ENST00000510526 400 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.47□□□□□ -2.01
CLPTM1O96005 RPL39P5-202ENST00000512505 151 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.47□□□□□ -2.01
CLPTM1O96005 RN7SKP24-201ENST00000515888 284 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 SNORA31.18-201ENST00000517043 134 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.47□□□□□ -2.01
CLPTM1O96005 COX6CP5-201ENST00000527162 228 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 AC006199.1-201ENST00000548728 219 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 LARP7P3-201ENST00000579888 337 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 MIR5092-201ENST00000583139 88 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 AL033523.1-201ENST00000605153 153 ntBASIC2.47□□□□□ -2.01
CLPTM1O96005 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLPTM1O96005 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.47□□□□□ -2.01
CLPTM1O96005 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.47□□□□□ -2.01
CLPTM1O96005 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLPTM1O96005 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLPTM1O96005 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
CLPTM1O96005 CDC27P3-201ENST00000635418 1910 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 Y_RNA.67-201ENST00000362870 100 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 RNU6-428P-201ENST00000362942 107 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 Y_RNA.509-201ENST00000384506 99 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 RNU6-306P-201ENST00000384617 107 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 RNU6-1304P-201ENST00000411374 106 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AL139396.1-201ENST00000421137 167 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AL135938.1-201ENST00000443141 297 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 HIGD1AP2-201ENST00000446367 280 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.46□□□□□ -2.02
CLPTM1O96005 RNU7-23P-201ENST00000459465 62 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC133134.1-201ENST00000466800 359 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC026801.1-201ENST00000497178 464 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC096745.1-201ENST00000509945 370 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC107222.1-201ENST00000510899 637 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC091826.1-201ENST00000514065 313 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AP004607.1-201ENST00000524456 203 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.46□□□□□ -2.02
CLPTM1O96005 AC103996.1-201ENST00000555468 102 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.46□□□□□ -2.02
CLPTM1O96005 AC021739.1-201ENST00000559631 174 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 MIR3117-201ENST00000584034 78 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 POLR3GP2-201ENST00000588366 668 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC016727.1-205ENST00000605437 569 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.46□□□□□ -2.02
CLPTM1O96005 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.46□□□□□ -2.02
CLPTM1O96005 AL359757.2-201ENST00000624309 274 ntBASIC2.46□□□□□ -2.02
CLPTM1O96005 SCARNA4-202ENST00000625402 129 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms