Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU6-658P-201ENST00000384606 106 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 RNU6-910P-201ENST00000390844 107 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 MIR1265-201ENST00000408444 86 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA1O95477 AC027644.1-201ENST00000419595 298 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
ABCA1O95477 RNU6-1261P-201ENST00000517194 104 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 MIR3169-201ENST00000578032 83 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AC105129.3-201ENST00000605455 485 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
ABCA1O95477 RNU6-862P-201ENST00000362804 105 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 RNU6-112P-201ENST00000363599 104 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
ABCA1O95477 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
ABCA1O95477 SNORD116-20-201ENST00000384529 92 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 MIR1912-201ENST00000410389 80 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AL161935.2-201ENST00000414627 60 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.39□□□□□ -2.35
ABCA1O95477 Z95118.1-201ENST00000421372 247 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA1O95477 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
ABCA1O95477 USP9YP22-201ENST00000438971 294 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AL096829.2-201ENST00000446582 742 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 CECR9-201ENST00000453421 199 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 RPL31P3-201ENST00000458430 332 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AC104563.1-201ENST00000476147 376 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 COX6CP6-201ENST00000490840 228 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AC134050.1-201ENST00000495088 933 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AC093259.1-201ENST00000509755 300 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 SCARNA1-201ENST00000517138 166 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 RNA5SP437-201ENST00000517249 129 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA1O95477 AP000763.2-201ENST00000540641 163 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 EIF4A1P12-201ENST00000551910 141 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AL590240.4-201ENST00000616908 390 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 AC099654.9-201ENST00000637055 678 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 U6.99-201ENST00000637524 83 ntBASIC0.39□□□□□ -2.35
ABCA1O95477 SNORD114-19-201ENST00000363072 75 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
ABCA1O95477 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA1O95477 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA1O95477 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA1O95477 ZFAND6P1-201ENST00000434138 605 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AL606517.1-201ENST00000446914 387 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 RPL37P6-201ENST00000460682 294 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 HMGB1P30-201ENST00000492455 606 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 SNORA31.4-201ENST00000516049 129 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC090142.3-201ENST00000519012 385 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA1O95477 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.38□□□□□ -2.35
ABCA1O95477 CYP4A27P-201ENST00000567218 190 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 MIR5094-201ENST00000578766 85 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC022022.2-201ENST00000602989 360 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC112220.2-201ENST00000605513 533 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
ABCA1O95477 RNU6-23P-201ENST00000363283 107 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 Y_RNA.234-201ENST00000364409 97 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 RNA5SP331-201ENST00000364986 107 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 RPL23AP32-201ENST00000395315 459 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AL117342.1-201ENST00000404861 406 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 RPL21P111-201ENST00000418453 477 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 BX119904.4-201ENST00000424402 301 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 ZNF886P-201ENST00000450781 723 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 snoU13.14-201ENST00000459372 104 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 RN7SKP88-201ENST00000516847 250 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 RNU6-165P-201ENST00000517170 99 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AP001189.2-201ENST00000527320 189 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA1O95477 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA1O95477 AL157871.3-201ENST00000557231 293 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC026741.1-201ENST00000605892 482 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 7SK.8-201ENST00000612110 250 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 FAM157A-202ENST00000615155 405 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 7SK.11-201ENST00000615477 250 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 7SK.13-201ENST00000622040 250 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC120349.2-201ENST00000625002 298 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AC008163.1-202ENST00000636004 2889 ntBASIC0.38□□□□□ -2.35
ABCA1O95477 AL079343.1-201ENST00000572358 1771 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
ABCA1O95477 BTF3L4P3-201ENST00000418879 476 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.37□□□□□ -2.35
ABCA1O95477 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.37□□□□□ -2.35
ABCA1O95477 EEF1E1P1-201ENST00000446998 430 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.37□□□□□ -2.35
ABCA1O95477 MTND1P31-201ENST00000449206 961 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 snoU13.19-201ENST00000459148 104 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 RNU6-1315P-201ENST00000517187 99 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
ABCA1O95477 MIR6718-201ENST00000616153 80 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 SCARNA4-202ENST00000625402 129 ntBASIC0.37□□□□□ -2.35
ABCA1O95477 RNU6-1284P-201ENST00000363701 100 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 RNA5SP299-201ENST00000391203 116 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.36□□□□□ -2.35
ABCA1O95477 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.36□□□□□ -2.35
ABCA1O95477 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.36□□□□□ -2.35
ABCA1O95477 AC024589.1-201ENST00000512207 263 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 RNU2-53P-201ENST00000516257 147 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 RNU6-390P-201ENST00000516259 103 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 RNVU1-2-201ENST00000516326 135 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms