Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPL21P99-201ENST00000480369 423 ntBASIC2.49□□□□□ -2.01
BEST1O76090 RPL38P4-201ENST00000502376 214 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST1O76090 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
BEST1O76090 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
BEST1O76090 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST1O76090 RNU6-720P-201ENST00000516363 108 ntBASIC2.49□□□□□ -2.01
BEST1O76090 RNU6-314P-201ENST00000516574 104 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC087854.1-201ENST00000519706 414 ntBASIC2.49□□□□□ -2.01
BEST1O76090 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST1O76090 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.49□□□□□ -2.01
BEST1O76090 EIF1P4-201ENST00000572664 335 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC092747.3-201ENST00000603769 301 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC009314.1-201ENST00000603871 304 ntBASIC2.49□□□□□ -2.01
BEST1O76090 SNORD14A-201ENST00000606526 91 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC245884.12-201ENST00000615364 59 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC090517.3-201ENST00000625170 141 ntBASIC2.49□□□□□ -2.01
BEST1O76090 AC068137.3-201ENST00000639191 341 ntBASIC2.49□□□□□ -2.01
BEST1O76090 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.49□□□□□ -2.01
BEST1O76090 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.49□□□□□ -2.01
BEST1O76090 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
BEST1O76090 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
BEST1O76090 RNU6-1285P-201ENST00000363480 105 ntBASIC2.48□□□□□ -2.01
BEST1O76090 RNU6-1141P-201ENST00000364520 107 ntBASIC2.48□□□□□ -2.01
BEST1O76090 RNU4-20P-201ENST00000365601 151 ntBASIC2.48□□□□□ -2.01
BEST1O76090 SNORA11.2-201ENST00000408318 127 ntBASIC2.48□□□□□ -2.01
BEST1O76090 USP9YP18-201ENST00000425912 695 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.48□□□□□ -2.01
BEST1O76090 RPS12P2-201ENST00000439728 269 ntBASIC2.48□□□□□ -2.01
BEST1O76090 MTCO2P3-201ENST00000442543 421 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.48□□□□□ -2.01
BEST1O76090 AC022447.4-201ENST00000504053 364 ntBASIC2.48□□□□□ -2.01
BEST1O76090 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AL157687.1-201ENST00000554853 619 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AC091544.4-201ENST00000555268 342 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AC103996.1-201ENST00000555468 102 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.48□□□□□ -2.01
BEST1O76090 SNORD53-201ENST00000579969 78 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AC107304.1-201ENST00000604229 296 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AC004492.1-201ENST00000607036 742 ntBASIC2.48□□□□□ -2.01
BEST1O76090 DISC2.1-201ENST00000612827 205 ntBASIC2.48□□□□□ -2.01
BEST1O76090 AL590808.1-201ENST00000618696 141 ntBASIC2.48□□□□□ -2.01
BEST1O76090 YWHAEP7-203ENST00000622054 312 ntBASIC2.48□□□□□ -2.01
BEST1O76090 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BEST1O76090 AP000560.1-201ENST00000624150 1937 ntBASIC2.47□□□□□ -2.01
BEST1O76090 U8.8-201ENST00000365399 135 ntBASIC2.47□□□□□ -2.01
BEST1O76090 SNORA25B-201ENST00000365507 128 ntBASIC2.47□□□□□ -2.01
BEST1O76090 Y_RNA.372-201ENST00000365599 102 ntBASIC2.47□□□□□ -2.01
BEST1O76090 Y_RNA.378-201ENST00000365652 113 ntBASIC2.47□□□□□ -2.01
BEST1O76090 RNU6-483P-201ENST00000384088 108 ntBASIC2.47□□□□□ -2.01
BEST1O76090 MIR514A2-201ENST00000385131 88 ntBASIC2.47□□□□□ -2.01
BEST1O76090 MIR514A3-201ENST00000385132 88 ntBASIC2.47□□□□□ -2.01
BEST1O76090 AL590002.1-201ENST00000406554 418 ntBASIC2.47□□□□□ -2.01
BEST1O76090 RNU4-53P-201ENST00000410828 140 ntBASIC2.47□□□□□ -2.01
BEST1O76090 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
BEST1O76090 AC018634.1-201ENST00000437554 401 ntBASIC2.47□□□□□ -2.01
BEST1O76090 RNU6-1208P-201ENST00000459588 107 ntBASIC2.47□□□□□ -2.01
BEST1O76090 AP000852.1-201ENST00000472460 573 ntBASIC2.47□□□□□ -2.01
BEST1O76090 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.47□□□□□ -2.01
BEST1O76090 AC008549.1-201ENST00000512900 643 ntBASIC2.47□□□□□ -2.01
BEST1O76090 RNA5SP281-201ENST00000516504 135 ntBASIC2.47□□□□□ -2.01
BEST1O76090 RNU6-1038P-201ENST00000516516 104 ntBASIC2.47□□□□□ -2.01
BEST1O76090 RNU6-1069P-201ENST00000516612 133 ntBASIC2.47□□□□□ -2.01
BEST1O76090 AL118558.2-201ENST00000556294 238 ntBASIC2.47□□□□□ -2.01
BEST1O76090 MIR3670-2-201ENST00000582974 65 ntBASIC2.47□□□□□ -2.01
BEST1O76090 MIR3670-1-201ENST00000584160 65 ntBASIC2.47□□□□□ -2.01
BEST1O76090 MIR3670-3-201ENST00000584855 65 ntBASIC2.47□□□□□ -2.01
BEST1O76090 MIR3670-4-201ENST00000612260 65 ntBASIC2.47□□□□□ -2.01
BEST1O76090 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.47□□□□□ -2.01
BEST1O76090 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
BEST1O76090 MIR1321-201ENST00000637766 79 ntBASIC2.47□□□□□ -2.01
BEST1O76090 AC241585.2-209ENST00000638217 143 ntBASIC2.47□□□□□ -2.01
BEST1O76090 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.47□□□□□ -2.01
BEST1O76090 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
BEST1O76090 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
BEST1O76090 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
BEST1O76090 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
BEST1O76090 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
BEST1O76090 Y_RNA.231-201ENST00000364358 102 ntBASIC2.46□□□□□ -2.02
BEST1O76090 RNU1-91P-201ENST00000364746 163 ntBASIC2.46□□□□□ -2.02
BEST1O76090 U3.13-201ENST00000364804 214 ntBASIC2.46□□□□□ -2.02
BEST1O76090 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
BEST1O76090 RNU6-301P-201ENST00000384277 107 ntBASIC2.46□□□□□ -2.02
BEST1O76090 RNU6-692P-201ENST00000384496 107 ntBASIC2.46□□□□□ -2.02
BEST1O76090 RNU6-1274P-201ENST00000384557 107 ntBASIC2.46□□□□□ -2.02
BEST1O76090 AL591034.2-201ENST00000402839 359 ntBASIC2.46□□□□□ -2.02
BEST1O76090 RNA5SP508-201ENST00000411327 119 ntBASIC2.46□□□□□ -2.02
BEST1O76090 RPS15AP28-201ENST00000435088 386 ntBASIC2.46□□□□□ -2.02
BEST1O76090 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.46□□□□□ -2.02
BEST1O76090 AL353752.1-201ENST00000454946 260 ntBASIC2.46□□□□□ -2.02
BEST1O76090 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.46□□□□□ -2.02
BEST1O76090 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.46□□□□□ -2.02
BEST1O76090 Y_RNA.704-201ENST00000516851 102 ntBASIC2.46□□□□□ -2.02
BEST1O76090 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.46□□□□□ -2.02
BEST1O76090 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.46□□□□□ -2.02
BEST1O76090 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.46□□□□□ -2.02
BEST1O76090 ZNF519P2-201ENST00000557032 169 ntBASIC2.46□□□□□ -2.02
BEST1O76090 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms