Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC092435.3-201ENST00000565538 3654 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 RNY1P16-201ENST00000363063 111 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 RNU4-42P-201ENST00000364738 142 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 RNU6-827P-201ENST00000365553 106 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 Y_RNA.533-201ENST00000384596 114 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 RNU6-1222P-201ENST00000384615 107 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 Y_RNA.577-201ENST00000384794 101 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 MIR10A-201ENST00000385043 110 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 RNU6-1109P-201ENST00000391187 107 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL5O76039 AL139281.1-201ENST00000422120 335 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 AL356867.1-201ENST00000429623 299 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 AC244505.4-201ENST00000434905 287 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL5O76039 SSXP5-201ENST00000443473 287 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 NDUFB1P2-201ENST00000449477 176 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL5O76039 ATP5F1P5-201ENST00000526403 760 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 AP000889.1-201ENST00000530968 660 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 AC012468.1-201ENST00000604888 430 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 AC007179.3-201ENST00000604976 235 ntBASIC3.43□□□□□ -1.86
CDKL5O76039 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL5O76039 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CDKL5O76039 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL5O76039 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDKL5O76039 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.42□□□□□ -1.86
CDKL5O76039 AC000403.1-201ENST00000613696 3585 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 RPL9P7-201ENST00000330965 580 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 MIR422A-201ENST00000362286 90 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 SNORA51.4-201ENST00000364993 124 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 SNORA63.7-201ENST00000365579 123 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 RNU6-741P-201ENST00000383889 107 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 Y_RNA.424-201ENST00000384063 103 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 MT-TG-201ENST00000387429 68 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 SNORA40C-201ENST00000391285 128 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.42□□□□□ -1.86
CDKL5O76039 Y_RNA.618-201ENST00000410949 107 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AL117339.3-201ENST00000418733 162 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 NUP35P1-201ENST00000422734 947 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.42□□□□□ -1.86
CDKL5O76039 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.42□□□□□ -1.86
CDKL5O76039 AL513043.1-201ENST00000439124 535 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.42□□□□□ -1.86
CDKL5O76039 RNU6-1037P-201ENST00000459571 107 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 RPL9P9-202ENST00000466501 579 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 RPL23AP45-201ENST00000476406 468 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.42□□□□□ -1.86
CDKL5O76039 Y_RNA.687-201ENST00000516558 91 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 SNORA31.19-201ENST00000517079 126 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 RNU6-1073P-201ENST00000517182 106 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AC009812.2-201ENST00000517657 457 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AC131281.1-201ENST00000522984 164 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AC022616.4-201ENST00000522985 181 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDKL5O76039 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.42□□□□□ -1.86
CDKL5O76039 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.42□□□□□ -1.86
CDKL5O76039 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.42□□□□□ -1.86
CDKL5O76039 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.42□□□□□ -1.86
CDKL5O76039 MIR5188-201ENST00000583467 113 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AL355297.3-201ENST00000604082 446 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 AC096577.2-201ENST00000611455 153 ntBASIC3.42□□□□□ -1.86
CDKL5O76039 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.42□□□□□ -1.86
CDKL5O76039 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDKL5O76039 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDKL5O76039 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.41□□□□□ -1.86
CDKL5O76039 Y_RNA.188-201ENST00000363952 111 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 Y_RNA.210-201ENST00000364161 110 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 RNU6-166P-201ENST00000384371 107 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 RNU6-851P-201ENST00000384565 107 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 AL591034.2-201ENST00000402839 359 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 MIR1290-201ENST00000408735 78 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.41□□□□□ -1.86
CDKL5O76039 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDKL5O76039 AL627311.1-201ENST00000431514 115 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.41□□□□□ -1.86
CDKL5O76039 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.41□□□□□ -1.86
CDKL5O76039 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.41□□□□□ -1.86
CDKL5O76039 AP004217.1-201ENST00000480579 346 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 SNORD59.2-201ENST00000516873 68 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 RNU6-1271P-201ENST00000517049 105 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 RNA5SP165-201ENST00000517142 115 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.41□□□□□ -1.86
CDKL5O76039 AC103996.1-201ENST00000555468 102 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.41□□□□□ -1.86
CDKL5O76039 AL021879.1-201ENST00000611756 288 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 MIR1244-1-201ENST00000612829 85 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 AC107871.2-201ENST00000612894 502 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 AL161629.2-201ENST00000615347 275 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 HMGB1P24-202ENST00000615653 685 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 MIR8057-201ENST00000620957 69 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 AC007792.1-201ENST00000623023 402 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.41□□□□□ -1.86
CDKL5O76039 MIR1244-3-201ENST00000635744 85 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 MIR1244-2-201ENST00000636449 85 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 MIR1244-4-202ENST00000636813 85 ntBASIC3.41□□□□□ -1.86
CDKL5O76039 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.41□□□□□ -1.86
CDKL5O76039 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms