Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC110760.3-201ENST00000598794 467 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AL034555.1-201ENST00000604816 211 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AC018889.1-201ENST00000605372 397 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AC011155.2-201ENST00000623202 216 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AC008993.2-201ENST00000631744 806 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 SNORD98-201ENST00000636377 67 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 U6.114-201ENST00000636407 96 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 ZNF680P1-201ENST00000436625 1469 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
UPK1BO75841 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.27□□□□□ -2.21
UPK1BO75841 RNU6-1287P-201ENST00000362914 107 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 RNU6-428P-201ENST00000362942 107 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 RNU6-715P-201ENST00000365204 103 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 RNU6-1060P-201ENST00000384664 107 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 Y_RNA.560-201ENST00000384689 102 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
UPK1BO75841 AL357139.1-201ENST00000407792 426 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 RNU6-293P-201ENST00000411259 106 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1BO75841 NCOR1P3-201ENST00000420479 303 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 MTND4P20-201ENST00000424125 869 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1BO75841 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1BO75841 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC079448.1-201ENST00000449377 373 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 GAPDHP17-201ENST00000449858 1001 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AL049873.1-201ENST00000480540 376 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC092436.1-201ENST00000506450 503 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 SNORA44.1-201ENST00000517031 108 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 HSPE1P18-201ENST00000517602 280 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1BO75841 AC115990.1-201ENST00000526957 301 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC110588.1-201ENST00000559699 137 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 MIR1273D-201ENST00000577266 86 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK1BO75841 AC011458.1-201ENST00000604034 617 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC116312.1-201ENST00000606841 314 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1BO75841 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC138649.3-201ENST00000622154 254 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 MIR7843-201ENST00000622274 79 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AC022513.1-201ENST00000624512 117 ntBASIC1.27□□□□□ -2.21
UPK1BO75841 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK1BO75841 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
UPK1BO75841 RNU6-1245P-201ENST00000411130 106 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 ISCA1P6-201ENST00000427740 390 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AL669831.1-202ENST00000428504 417 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 MTND5P25-201ENST00000430499 799 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AL121601.2-201ENST00000438019 707 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 RPL7P54-201ENST00000438336 674 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AC096638.1-201ENST00000444678 216 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK1BO75841 AMD1P1-201ENST00000457220 922 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.26□□□□□ -2.21
UPK1BO75841 AC005178.1-201ENST00000508392 440 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 RNU6-377P-201ENST00000515965 102 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK1BO75841 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK1BO75841 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.26□□□□□ -2.21
UPK1BO75841 SUB1P4-201ENST00000566062 339 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AC098848.2-201ENST00000588023 330 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 BNIP3P8-201ENST00000597863 560 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AC107304.1-201ENST00000604229 296 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AC123912.5-201ENST00000605470 343 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 BX248123.2-201ENST00000606318 124 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 AL136370.1-201ENST00000608166 691 ntBASIC1.26□□□□□ -2.21
UPK1BO75841 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
UPK1BO75841 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK1BO75841 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
UPK1BO75841 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
UPK1BO75841 RNU6-661P-201ENST00000362409 107 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 RNU6-43P-201ENST00000384302 107 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 RNA5SP425-201ENST00000410336 112 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 RPS3AP3-201ENST00000411933 242 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 DPH3P2-201ENST00000422618 250 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK1BO75841 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK1BO75841 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.25□□□□□ -2.21
UPK1BO75841 GTF2IP13-201ENST00000438487 386 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK1BO75841 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK1BO75841 RNU6-333P-201ENST00000459117 107 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC027575.1-201ENST00000481064 460 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC098862.1-201ENST00000504991 413 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC104136.1-201ENST00000512969 394 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 SNORA31.16-201ENST00000516773 139 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 MIR5094-201ENST00000578766 85 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK1BO75841 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK1BO75841 MIR8074-201ENST00000615081 81 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC084768.2-201ENST00000622736 221 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC068787.1-201ENST00000623908 691 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC110994.2-201ENST00000635481 492 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC092881.1-201ENST00000638218 2733 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK1BO75841 MTND5P17-201ENST00000418405 1603 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms