Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 AP000942.4-201ENST00000604811 241 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC090578.1-201ENST00000604955 591 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC242852.1-201ENST00000612151 96 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC244015.1-201ENST00000622301 99 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 SUGT1P1-201ENST00000379514 476 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 MIR605-201ENST00000385078 83 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 MIR140-201ENST00000385282 100 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 TAF9BP2-201ENST00000400856 499 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 ARL5AP1-201ENST00000418991 388 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 AC007969.2-201ENST00000441891 191 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC-0.17□□□□□ -2.44
USH2AO75445 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC-0.17□□□□□ -2.44
USH2AO75445 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.17□□□□□ -2.44
USH2AO75445 MIR3609-201ENST00000582661 80 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC024257.5-201ENST00000612739 531 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 AC016597.2-201ENST00000613256 341 ntBASIC-0.17□□□□□ -2.44
USH2AO75445 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RNU6-747P-201ENST00000390928 104 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RNU6-241P-201ENST00000391148 104 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RAP1BP3-201ENST00000407180 549 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC073261.1-201ENST00000429409 121 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC108729.1-201ENST00000487812 947 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 CYCSP27-201ENST00000527643 293 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 DUXAP1-201ENST00000556632 463 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.18□□□□□ -2.44
USH2AO75445 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 SNORA36.2-201ENST00000384004 127 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH2AO75445 C1DP1-201ENST00000426049 402 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AL589872.1-201ENST00000426602 288 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
USH2AO75445 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.18□□□□□ -2.44
USH2AO75445 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH2AO75445 SNORA4.4-201ENST00000515921 135 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RNU6-803P-201ENST00000516034 102 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC106038.2-201ENST00000520706 568 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AL356432.3-201ENST00000568952 465 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RPL23AP91-201ENST00000569211 455 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 MIR5692A1-201ENST00000580523 69 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC116563.2-201ENST00000624751 535 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH2AO75445 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH2AO75445 AC006210.1-201ENST00000424882 111 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH2AO75445 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH2AO75445 STAG3L5P-204ENST00000443759 179 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC114755.3-201ENST00000481111 251 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC025465.3-201ENST00000510570 311 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RN7SKP88-201ENST00000516847 250 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
USH2AO75445 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.18□□□□□ -2.44
USH2AO75445 AC138207.3-201ENST00000585289 166 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 7SK.8-201ENST00000612110 250 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AL161629.2-201ENST00000615347 275 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 7SK.11-201ENST00000615477 250 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC092634.7-201ENST00000621022 103 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RMST_7.1-201ENST00000621935 268 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 7SK.13-201ENST00000622040 250 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AL157786.1-207ENST00000627771 695 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC-0.18□□□□□ -2.44
USH2AO75445 AC092447.10-201ENST00000620607 1652 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 RNU6-529P-201ENST00000363383 104 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC016909.1-201ENST00000415916 166 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
USH2AO75445 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 AC116562.3-201ENST00000506136 177 ntBASIC-0.18□□□□□ -2.44
USH2AO75445 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH2AO75445 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
USH2AO75445 MIR103A1-201ENST00000362165 78 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
USH2AO75445 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.19□□□□□ -2.44
USH2AO75445 AC063976.4-201ENST00000421971 163 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 SNRPEP9-201ENST00000436794 238 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.19□□□□□ -2.44
USH2AO75445 AC016065.2-201ENST00000514530 444 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC-0.19□□□□□ -2.44
USH2AO75445 SNORD39.2-201ENST00000579995 76 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 HMGN2P15-201ENST00000585707 270 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL390208.1-201ENST00000605885 644 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.19□□□□□ -2.44
USH2AO75445 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 MTND5P30-201ENST00000452896 1731 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-815P-201ENST00000384080 113 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms