Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF40AO75400 TGIF1P1-201ENST00000558095 802 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 MIR5571-201ENST00000577998 113 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 AC006130.2-201ENST00000586202 326 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 Y_RNA.772-201ENST00000606692 102 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF40AO75400 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PRPF40AO75400 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF40AO75400 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF40AO75400 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF40AO75400 RNU6-1159P-201ENST00000362933 107 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 RNU6-879P-201ENST00000364328 108 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 RNU6-213P-201ENST00000384051 104 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 RNU6-622P-201ENST00000384272 103 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 Y_RNA.483-201ENST00000384380 101 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF40AO75400 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF40AO75400 RPL23AP62-201ENST00000463396 453 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF40AO75400 RNU6-1114P-201ENST00000516022 107 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF40AO75400 AC105137.2-201ENST00000569073 466 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 MIR5685-201ENST00000579080 79 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 AL138963.2-201ENST00000605137 226 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PRPF40AO75400 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.23□□□□□ -1.73
PRPF40AO75400 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF40AO75400 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF40AO75400 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PRPF40AO75400 AC002543.1-201ENST00000299783 1954 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF40AO75400 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF40AO75400 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.22□□□□□ -1.73
PRPF40AO75400 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PRPF40AO75400 Y_RNA.319-201ENST00000365138 92 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 RNU6-748P-201ENST00000384648 107 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 MT-TW-201ENST00000387382 68 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 MIR147B-201ENST00000390185 80 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRPF40AO75400 RNA5SP252-201ENST00000391131 119 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 EI24P2-201ENST00000397776 1076 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF40AO75400 BX679664.1-201ENST00000434429 253 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF40AO75400 RNU6-1132P-201ENST00000459214 107 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 AC110768.1-201ENST00000509222 400 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 RNA5SP164-201ENST00000516533 110 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 RNU1-45P-201ENST00000517191 141 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 AC115990.1-201ENST00000526957 301 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.22□□□□□ -1.73
PRPF40AO75400 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF40AO75400 AC091152.3-201ENST00000604227 325 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF40AO75400 AL136164.4-201ENST00000625013 2135 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 AC007256.1-201ENST00000392253 2765 ntBASIC4.22□□□□□ -1.73
PRPF40AO75400 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRPF40AO75400 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PRPF40AO75400 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.21□□□□□ -1.73
PRPF40AO75400 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF40AO75400 RNU6-1301P-201ENST00000362724 104 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 U1.1-201ENST00000384101 164 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 SNORA36A-201ENST00000384221 132 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 MIR554-201ENST00000384874 96 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PRPF40AO75400 RNU1-139P-201ENST00000391307 165 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 PTMAP5-201ENST00000393073 333 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 CYCSP19-201ENST00000411715 316 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AC138623.1-201ENST00000418060 216 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 RPS15AP7-201ENST00000439294 405 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AC016700.2-201ENST00000446011 156 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF40AO75400 TRBVB-201ENST00000477100 408 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 SNORA31.1-201ENST00000515993 133 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 SNORA31.5-201ENST00000516190 133 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AP006245.1-201ENST00000522549 120 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF40AO75400 CYCSP30-201ENST00000546447 172 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF40AO75400 AL354798.1-201ENST00000622505 329 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AC034229.5-201ENST00000624258 185 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF40AO75400 AC010615.1-201ENST00000594254 1764 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 AC068647.1-201ENST00000489539 2265 ntBASIC4.21□□□□□ -1.74
PRPF40AO75400 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PRPF40AO75400 AC010889.1-201ENST00000566193 2666 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 AC010680.1-201ENST00000590024 3590 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 AP002088.1-201ENST00000382740 395 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PRPF40AO75400 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF40AO75400 SNORA3.3-201ENST00000408712 125 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 AL591419.1-201ENST00000427423 339 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PRPF40AO75400 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.2□□□□□ -1.74
PRPF40AO75400 SNORD127-201ENST00000458892 86 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 SNORA84-201ENST00000459229 133 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 RN7SL542P-201ENST00000467147 294 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 AC025465.3-201ENST00000510570 311 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 SCARNA14-201ENST00000516903 136 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 RNU6-1198P-201ENST00000516904 67 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms