Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD1O75127 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD1O75127 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCD1O75127 AC008725.1-201ENST00000605123 2263 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 SNORA31-201ENST00000362607 130 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 SNORD113-8-201ENST00000363497 74 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 RNU1-33P-201ENST00000364249 162 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 Y_RNA.304-201ENST00000365011 112 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCD1O75127 SNORA48.2-201ENST00000390926 124 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 RNU6-1135P-201ENST00000411083 103 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 RNA5SP306-201ENST00000411087 107 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCD1O75127 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.69□□□□□ -1.66
PTCD1O75127 AC125238.1-201ENST00000448842 249 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 RBMY2UP-201ENST00000453474 324 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 AC087477.1-201ENST00000465747 340 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 AL049830.2-201ENST00000480072 201 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 RPL32P34-201ENST00000486380 400 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 MRPS18CP4-201ENST00000535821 231 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCD1O75127 AC072026.1-201ENST00000605023 201 ntBASIC4.69□□□□□ -1.66
PTCD1O75127 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PTCD1O75127 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCD1O75127 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCD1O75127 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCD1O75127 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PTCD1O75127 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTCD1O75127 AC007390.2-201ENST00000606229 3803 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTCD1O75127 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PTCD1O75127 RNU1-100P-201ENST00000365255 165 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 MIR153-2-201ENST00000385225 87 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 RNA5SP120-201ENST00000410900 112 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCD1O75127 AC005300.1-201ENST00000428401 373 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 AC016700.2-201ENST00000446011 156 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCD1O75127 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.68□□□□□ -1.66
PTCD1O75127 HSPE1P25-201ENST00000455484 251 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 AP000870.1-201ENST00000472927 406 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 AF186996.7-201ENST00000492781 209 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCD1O75127 RNU6-496P-201ENST00000516145 99 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 RNU6-313P-201ENST00000516317 112 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 AP004242.1-201ENST00000533701 349 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 MIR3690-201ENST00000580266 75 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 U6.106-201ENST00000636360 105 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PTCD1O75127 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCD1O75127 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCD1O75127 AL049781.1-201ENST00000623195 3585 ntBASIC4.68□□□□□ -1.66
PTCD1O75127 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTCD1O75127 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PTCD1O75127 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PTCD1O75127 AC083843.3-201ENST00000623679 2186 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD1O75127 RNU4-35P-201ENST00000362588 141 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 Y_RNA.240-201ENST00000364469 95 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 RNU6-541P-201ENST00000384709 110 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 RNU6-918P-201ENST00000391219 106 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 AC017083.1-201ENST00000428093 483 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 S100A11P1-201ENST00000477525 312 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 MRPL42P6-201ENST00000486397 371 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 SEPT14P8-201ENST00000508026 178 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCD1O75127 BRDTP1-201ENST00000605735 677 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 MIR6134-201ENST00000617606 109 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PTCD1O75127 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD1O75127 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PTCD1O75127 IPO8P1-201ENST00000455509 3109 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD1O75127 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PTCD1O75127 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PTCD1O75127 AL353743.1-202ENST00000431724 1695 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 AC022336.2-201ENST00000568966 2538 ntBASIC4.67□□□□□ -1.66
PTCD1O75127 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD1O75127 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCD1O75127 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCD1O75127 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCD1O75127 LINC02471-203ENST00000641941 4752 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTCD1O75127 SNORD115-32-201ENST00000364079 82 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 Y_RNA.233-201ENST00000364407 101 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 Y_RNA.292-201ENST00000364904 97 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 RNU6-142P-201ENST00000384019 107 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 SNORA29-201ENST00000384183 140 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 RNU6-1168P-201ENST00000390831 104 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 MIR888-201ENST00000401186 77 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 YPEL5P1-201ENST00000419731 367 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.66□□□□□ -1.66
PTCD1O75127 AC005326.1-201ENST00000429197 123 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 FTH1P6-201ENST00000430768 320 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 RPS15AP7-201ENST00000439294 405 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 AL353748.1-201ENST00000440753 474 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCD1O75127 TRBV12-2-201ENST00000489763 344 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 BTF3L4P4-201ENST00000506381 449 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 AC019159.1-201ENST00000605094 187 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms