Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 MIR4273-201ENST00000582824 84 ntBASIC3.12□□□□□ -1.91
RRP9O43818 MIR6875-201ENST00000617506 72 ntBASIC3.12□□□□□ -1.91
RRP9O43818 AC007742.2-201ENST00000618226 398 ntBASIC3.12□□□□□ -1.91
RRP9O43818 AC134503.1-201ENST00000633048 54 ntBASIC3.12□□□□□ -1.91
RRP9O43818 AC241585.2-209ENST00000638217 143 ntBASIC3.12□□□□□ -1.91
RRP9O43818 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.12□□□□□ -1.91
RRP9O43818 AC008669.1-201ENST00000565823 2178 ntBASIC3.12□□□□□ -1.91
RRP9O43818 MTCO1P12-201ENST00000414273 1543 ntBASIC3.12□□□□□ -1.91
RRP9O43818 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RRP9O43818 MIR369-201ENST00000362155 70 ntBASIC3.11□□□□□ -1.91
RRP9O43818 MIR372-201ENST00000362225 67 ntBASIC3.11□□□□□ -1.91
RRP9O43818 RNU6-843P-201ENST00000384454 104 ntBASIC3.11□□□□□ -1.91
RRP9O43818 RNU6-748P-201ENST00000384648 107 ntBASIC3.11□□□□□ -1.91
RRP9O43818 RNU6-331P-201ENST00000384724 107 ntBASIC3.11□□□□□ -1.91
RRP9O43818 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RRP9O43818 AP000275.1-201ENST00000411943 390 ntBASIC3.11□□□□□ -1.91
RRP9O43818 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.11□□□□□ -1.91
RRP9O43818 DBIP2-201ENST00000419076 262 ntBASIC3.11□□□□□ -1.91
RRP9O43818 RPL23AP50-201ENST00000434149 455 ntBASIC3.11□□□□□ -1.91
RRP9O43818 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.11□□□□□ -1.91
RRP9O43818 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.11□□□□□ -1.91
RRP9O43818 RPS29P27-201ENST00000463711 170 ntBASIC3.11□□□□□ -1.91
RRP9O43818 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.11□□□□□ -1.91
RRP9O43818 AC108043.1-201ENST00000512696 574 ntBASIC3.11□□□□□ -1.91
RRP9O43818 SNORA31.23-201ENST00000517219 133 ntBASIC3.11□□□□□ -1.91
RRP9O43818 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.11□□□□□ -1.91
RRP9O43818 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.11□□□□□ -1.91
RRP9O43818 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.11□□□□□ -1.91
RRP9O43818 AP001836.1-201ENST00000604675 523 ntBASIC3.11□□□□□ -1.91
RRP9O43818 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.11□□□□□ -1.91
RRP9O43818 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.11□□□□□ -1.91
RRP9O43818 AC099654.10-201ENST00000640395 161 ntBASIC3.11□□□□□ -1.91
RRP9O43818 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.11□□□□□ -1.91
RRP9O43818 AC007336.1-201ENST00000576365 3828 ntBASIC3.11□□□□□ -1.91
RRP9O43818 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RRP9O43818 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RRP9O43818 SNORA63-201ENST00000363450 132 ntBASIC3.1□□□□□ -1.91
RRP9O43818 Y_RNA.197-201ENST00000364004 102 ntBASIC3.1□□□□□ -1.91
RRP9O43818 RNU6-487P-201ENST00000365430 104 ntBASIC3.1□□□□□ -1.91
RRP9O43818 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.1□□□□□ -1.91
RRP9O43818 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.1□□□□□ -1.91
RRP9O43818 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.1□□□□□ -1.91
RRP9O43818 AC092427.1-202ENST00000430569 476 ntBASIC3.1□□□□□ -1.91
RRP9O43818 MTCYBP6-201ENST00000441810 138 ntBASIC3.1□□□□□ -1.91
RRP9O43818 AC243964.1-201ENST00000441814 261 ntBASIC3.1□□□□□ -1.91
RRP9O43818 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RRP9O43818 MIR2053-201ENST00000459295 91 ntBASIC3.1□□□□□ -1.91
RRP9O43818 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.1□□□□□ -1.91
RRP9O43818 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.1□□□□□ -1.91
RRP9O43818 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.1□□□□□ -1.91
RRP9O43818 MIR5694-201ENST00000581190 76 ntBASIC3.1□□□□□ -1.91
RRP9O43818 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.1□□□□□ -1.91
RRP9O43818 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RRP9O43818 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.1□□□□□ -1.91
RRP9O43818 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RRP9O43818 Y_RNA.128-201ENST00000363391 112 ntBASIC3.09□□□□□ -1.91
RRP9O43818 Y_RNA.395-201ENST00000383945 109 ntBASIC3.09□□□□□ -1.91
RRP9O43818 Y_RNA.445-201ENST00000384168 102 ntBASIC3.09□□□□□ -1.91
RRP9O43818 RNU6-692P-201ENST00000384496 107 ntBASIC3.09□□□□□ -1.91
RRP9O43818 SNORA41-201ENST00000384675 132 ntBASIC3.09□□□□□ -1.91
RRP9O43818 MIR147B-201ENST00000390185 80 ntBASIC3.09□□□□□ -1.91
RRP9O43818 RNA5SP354-201ENST00000391247 136 ntBASIC3.09□□□□□ -1.91
RRP9O43818 BTF3L4P2-201ENST00000392798 346 ntBASIC3.09□□□□□ -1.91
RRP9O43818 MIR548P-201ENST00000408336 84 ntBASIC3.09□□□□□ -1.91
RRP9O43818 AC007064.1-201ENST00000412238 351 ntBASIC3.09□□□□□ -1.91
RRP9O43818 EIF4EP2-201ENST00000422816 654 ntBASIC3.09□□□□□ -1.91
RRP9O43818 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
RRP9O43818 AC011816.1-201ENST00000441346 546 ntBASIC3.09□□□□□ -1.91
RRP9O43818 AC007969.2-201ENST00000441891 191 ntBASIC3.09□□□□□ -1.91
RRP9O43818 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.09□□□□□ -1.91
RRP9O43818 AL441985.1-201ENST00000457727 251 ntBASIC3.09□□□□□ -1.91
RRP9O43818 Y_RNA.631-201ENST00000459607 101 ntBASIC3.09□□□□□ -1.91
RRP9O43818 AC097462.2-201ENST00000504623 481 ntBASIC3.09□□□□□ -1.91
RRP9O43818 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.09□□□□□ -1.91
RRP9O43818 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.09□□□□□ -1.91
RRP9O43818 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
RRP9O43818 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.09□□□□□ -1.91
RRP9O43818 BNIP3P22-201ENST00000593399 556 ntBASIC3.09□□□□□ -1.91
RRP9O43818 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.09□□□□□ -1.91
RRP9O43818 AL391813.1-201ENST00000603098 260 ntBASIC3.09□□□□□ -1.91
RRP9O43818 AL355877.2-201ENST00000603670 358 ntBASIC3.09□□□□□ -1.91
RRP9O43818 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.09□□□□□ -1.91
RRP9O43818 RBBP8P1-201ENST00000449447 1844 ntBASIC3.09□□□□□ -1.92
RRP9O43818 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RRP9O43818 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RRP9O43818 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.08□□□□□ -1.92
RRP9O43818 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
RRP9O43818 SNORA3.3-201ENST00000408712 125 ntBASIC3.08□□□□□ -1.92
RRP9O43818 RN7SKP111-201ENST00000410349 271 ntBASIC3.08□□□□□ -1.92
RRP9O43818 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.08□□□□□ -1.92
RRP9O43818 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.08□□□□□ -1.92
RRP9O43818 FO393415.2-201ENST00000480085 343 ntBASIC3.08□□□□□ -1.92
RRP9O43818 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.08□□□□□ -1.92
RRP9O43818 RPS27P26-201ENST00000494583 239 ntBASIC3.08□□□□□ -1.92
RRP9O43818 RNU6-470P-201ENST00000515954 104 ntBASIC3.08□□□□□ -1.92
RRP9O43818 RNU6-976P-201ENST00000516086 111 ntBASIC3.08□□□□□ -1.92
RRP9O43818 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.08□□□□□ -1.92
RRP9O43818 AC009812.2-201ENST00000517657 457 ntBASIC3.08□□□□□ -1.92
RRP9O43818 CKS1BP7-201ENST00000522230 235 ntBASIC3.08□□□□□ -1.92
RRP9O43818 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms