Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 RPL21P16-201ENST00000495531 483 ntBASIC3.2□□□□□ -1.9
TSPAN6O43657 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.2□□□□□ -1.9
TSPAN6O43657 RNU6-1016P-201ENST00000516689 94 ntBASIC3.2□□□□□ -1.9
TSPAN6O43657 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.2□□□□□ -1.9
TSPAN6O43657 RNU6-586P-201ENST00000517265 104 ntBASIC3.2□□□□□ -1.9
TSPAN6O43657 HSPE1P20-201ENST00000538133 289 ntBASIC3.2□□□□□ -1.9
TSPAN6O43657 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.2□□□□□ -1.9
TSPAN6O43657 AL034555.1-201ENST00000604816 211 ntBASIC3.2□□□□□ -1.9
TSPAN6O43657 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.2□□□□□ -1.9
TSPAN6O43657 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TSPAN6O43657 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.19□□□□□ -1.9
TSPAN6O43657 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TSPAN6O43657 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TSPAN6O43657 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TSPAN6O43657 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 Y_RNA.184-201ENST00000363884 108 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TSPAN6O43657 SNORA26.3-201ENST00000391119 136 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 SNORA48.5-201ENST00000391143 135 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 AL356432.1-201ENST00000405809 419 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 AL161788.1-201ENST00000441805 169 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.19□□□□□ -1.9
TSPAN6O43657 AC090525.1-201ENST00000479116 478 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.19□□□□□ -1.9
TSPAN6O43657 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
TSPAN6O43657 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.19□□□□□ -1.9
TSPAN6O43657 IMMP1LP2-201ENST00000552954 492 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 FGF7P1-201ENST00000582820 288 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.19□□□□□ -1.9
TSPAN6O43657 AC060766.3-201ENST00000591442 263 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 AL713866.2-201ENST00000603579 219 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 AL138963.2-201ENST00000605137 226 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TSPAN6O43657 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TSPAN6O43657 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.19□□□□□ -1.9
TSPAN6O43657 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
TSPAN6O43657 AC135776.4-201ENST00000624300 1904 ntBASIC3.19□□□□□ -1.9
TSPAN6O43657 AL021368.2-201ENST00000606125 5352 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.18□□□□□ -1.9
TSPAN6O43657 Y_RNA.339-201ENST00000365325 102 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 RNU6-784P-201ENST00000384330 106 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 Y_RNA.482-201ENST00000384377 111 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 RNU6-601P-201ENST00000384540 107 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 RNU6-306P-201ENST00000384617 107 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 AL591034.2-201ENST00000402839 359 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.18□□□□□ -1.9
TSPAN6O43657 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.18□□□□□ -1.9
TSPAN6O43657 AC003685.2-201ENST00000422795 395 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 EIF4EP2-201ENST00000422816 654 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 MIR3923-201ENST00000579521 83 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 uc_338.25-201ENST00000613756 156 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 MIR622-201ENST00000638396 96 ntBASIC3.18□□□□□ -1.9
TSPAN6O43657 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TSPAN6O43657 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TSPAN6O43657 AL353743.1-202ENST00000431724 1695 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TSPAN6O43657 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TSPAN6O43657 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TSPAN6O43657 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.17□□□□□ -1.9
TSPAN6O43657 MIR422A-201ENST00000362286 90 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 RNU1-72P-201ENST00000362976 153 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 RNU6-596P-201ENST00000365395 98 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 RNU6-968P-201ENST00000384076 107 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 AC096664.2-201ENST00000411843 406 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.17□□□□□ -1.9
TSPAN6O43657 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.17□□□□□ -1.9
TSPAN6O43657 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.17□□□□□ -1.9
TSPAN6O43657 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.17□□□□□ -1.9
TSPAN6O43657 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.17□□□□□ -1.9
TSPAN6O43657 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TSPAN6O43657 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.17□□□□□ -1.9
TSPAN6O43657 MIR4273-201ENST00000582824 84 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 AC078899.3-201ENST00000599065 212 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 AL355297.2-201ENST00000604792 129 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.17□□□□□ -1.9
TSPAN6O43657 AL162274.2-201ENST00000614406 332 ntBASIC3.17□□□□□ -1.9
TSPAN6O43657 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.17□□□□□ -1.9
TSPAN6O43657 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TSPAN6O43657 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.16□□□□□ -1.9
TSPAN6O43657 RNU6-1286P-201ENST00000383871 107 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 SNORD15B-201ENST00000384714 146 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 MIR128-1-201ENST00000384921 82 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.16□□□□□ -1.9
TSPAN6O43657 SNORD5.1-201ENST00000458800 75 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 AC090515.1-201ENST00000465295 476 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.16□□□□□ -1.9
TSPAN6O43657 AC091951.2-201ENST00000500762 203 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 AC091874.1-201ENST00000511402 339 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 RNU6-875P-201ENST00000516488 106 ntBASIC3.16□□□□□ -1.9
TSPAN6O43657 AC105029.1-201ENST00000520250 669 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms