Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 MRPL42P2-201ENST00000403169 426 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 RNU2-39P-201ENST00000410604 198 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 RNA5SP111-201ENST00000411386 101 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 RPL21P90-201ENST00000415692 466 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 HMGB1P30-201ENST00000492455 606 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.56□□□□□ -2.16
CHMP2AO43633 MTND3P25-201ENST00000509243 135 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 RN7SKP287-201ENST00000516546 266 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC109329.1-201ENST00000518744 317 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC022878.1-201ENST00000530684 149 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC022616.8-201ENST00000533569 253 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.56□□□□□ -2.16
CHMP2AO43633 BNIP3P6-201ENST00000549284 499 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.56□□□□□ -2.16
CHMP2AO43633 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.56□□□□□ -2.16
CHMP2AO43633 AC090616.2-202ENST00000584248 222 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 MIR548AC-201ENST00000585049 88 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC078795.2-201ENST00000602835 1252 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC093424.1-201ENST00000604999 338 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AL359547.2-201ENST00000615810 418 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 U1.36-201ENST00000620684 176 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC097372.5-201ENST00000623665 376 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AF246928.1-201ENST00000623768 87 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 AC073343.1-201ENST00000328239 651 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 U8.1-201ENST00000362843 134 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 SNORA7.1-201ENST00000363750 139 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 RNU6-553P-201ENST00000364047 96 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 RNU6-371P-201ENST00000364283 108 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 SNORA20.2-201ENST00000383922 131 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 RPL23AP32-201ENST00000395315 459 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.55□□□□□ -2.16
CHMP2AO43633 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.55□□□□□ -2.16
CHMP2AO43633 RPL23AP36-201ENST00000413895 458 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.55□□□□□ -2.16
CHMP2AO43633 ISCA1P6-201ENST00000427740 390 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 RPS24P1-201ENST00000438550 371 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.55□□□□□ -2.16
CHMP2AO43633 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.55□□□□□ -2.16
CHMP2AO43633 AC003071.1-201ENST00000451219 789 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.55□□□□□ -2.16
CHMP2AO43633 RPL30P12-201ENST00000474666 353 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 AC108729.3-201ENST00000513484 108 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.55□□□□□ -2.16
CHMP2AO43633 FABP5P5-201ENST00000515537 406 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 RNA5SP61-201ENST00000516453 100 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 RNU6-232P-201ENST00000517144 64 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.55□□□□□ -2.16
CHMP2AO43633 MIR4760-201ENST00000585040 80 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 AL133173.2-201ENST00000614270 90 ntBASIC1.55□□□□□ -2.16
CHMP2AO43633 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
CHMP2AO43633 FARSBP1-201ENST00000435808 1778 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CHMP2AO43633 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CHMP2AO43633 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CHMP2AO43633 MIR412-201ENST00000362142 91 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 snoU2_19.1-201ENST00000362361 80 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 RNU6-212P-201ENST00000362642 104 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 RNU6-1303P-201ENST00000364841 107 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CHMP2AO43633 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 RNU6-622P-201ENST00000384272 103 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 Y_RNA.576-201ENST00000384781 102 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP2AO43633 C1DP2-201ENST00000418167 426 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP2AO43633 Z82205.1-201ENST00000428456 297 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 AL627311.1-201ENST00000431514 115 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP2AO43633 AL360221.1-201ENST00000445989 335 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP2AO43633 AL353752.1-201ENST00000454946 260 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 MTCO3P9-201ENST00000506989 781 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.54□□□□□ -2.16
CHMP2AO43633 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP2AO43633 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.54□□□□□ -2.16
CHMP2AO43633 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.54□□□□□ -2.16
CHMP2AO43633 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.54□□□□□ -2.16
CHMP2AO43633 MIR3915-201ENST00000578518 97 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 AC174048.1-201ENST00000603389 144 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 CYP2C61P-201ENST00000604072 290 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.54□□□□□ -2.16
CHMP2AO43633 AC087683.2-201ENST00000611384 326 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.54□□□□□ -2.16
CHMP2AO43633 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.54□□□□□ -2.16
CHMP2AO43633 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.54□□□□□ -2.16
CHMP2AO43633 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.54□□□□□ -2.16
CHMP2AO43633 SNORD56.1-201ENST00000362913 68 ntBASIC1.53□□□□□ -2.16
CHMP2AO43633 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHMP2AO43633 RNU6-338P-201ENST00000383888 105 ntBASIC1.53□□□□□ -2.16
CHMP2AO43633 RNU6-116P-201ENST00000384042 109 ntBASIC1.53□□□□□ -2.16
CHMP2AO43633 RNU6-297P-201ENST00000384636 107 ntBASIC1.53□□□□□ -2.16
CHMP2AO43633 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CHMP2AO43633 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHMP2AO43633 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHMP2AO43633 AC068050.1-201ENST00000394891 380 ntBASIC1.53□□□□□ -2.16
CHMP2AO43633 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.53□□□□□ -2.16
CHMP2AO43633 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.53□□□□□ -2.16
CHMP2AO43633 MTCO3P5-201ENST00000433620 714 ntBASIC1.53□□□□□ -2.16
CHMP2AO43633 AL162395.1-201ENST00000457882 422 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms