Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
PROM1O43490 FAM35BP-202ENST00000497389 3337 ntBASIC3.24□□□□□ -1.89
PROM1O43490 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PROM1O43490 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PROM1O43490 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
PROM1O43490 RNU6-78P-201ENST00000362897 107 ntBASIC3.24□□□□□ -1.89
PROM1O43490 U3.6-201ENST00000363622 211 ntBASIC3.24□□□□□ -1.89
PROM1O43490 RNA5SP139-201ENST00000364340 117 ntBASIC3.24□□□□□ -1.89
PROM1O43490 Y_RNA.380-201ENST00000365663 111 ntBASIC3.24□□□□□ -1.89
PROM1O43490 RNU6-72P-201ENST00000384285 79 ntBASIC3.24□□□□□ -1.89
PROM1O43490 MIR490-201ENST00000384865 128 ntBASIC3.24□□□□□ -1.89
PROM1O43490 MIR628-201ENST00000385229 95 ntBASIC3.24□□□□□ -1.89
PROM1O43490 MTCO3P8-201ENST00000453691 755 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AL031183.1-201ENST00000457667 207 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AC010655.3-201ENST00000478818 450 ntBASIC3.24□□□□□ -1.89
PROM1O43490 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.24□□□□□ -1.89
PROM1O43490 RNU1-103P-201ENST00000516502 125 ntBASIC3.24□□□□□ -1.89
PROM1O43490 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.24□□□□□ -1.89
PROM1O43490 AC040926.1-201ENST00000530195 238 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PROM1O43490 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.24□□□□□ -1.89
PROM1O43490 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AMZ2P1-203ENST00000565833 850 ntBASIC3.24□□□□□ -1.89
PROM1O43490 MIR5188-201ENST00000583467 113 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AC016727.2-201ENST00000603988 621 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AL355297.3-201ENST00000604082 446 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AL355598.1-201ENST00000604169 202 ntBASIC3.24□□□□□ -1.89
PROM1O43490 Z98751.3-201ENST00000604447 521 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AC100812.1-201ENST00000607622 580 ntBASIC3.24□□□□□ -1.89
PROM1O43490 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.24□□□□□ -1.89
PROM1O43490 SCARNA4-202ENST00000625402 129 ntBASIC3.24□□□□□ -1.89
PROM1O43490 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.24□□□□□ -1.89
PROM1O43490 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.24□□□□□ -1.89
PROM1O43490 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PROM1O43490 AC010680.1-201ENST00000590024 3590 ntBASIC3.23□□□□□ -1.89
PROM1O43490 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
PROM1O43490 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PROM1O43490 AC017071.1-201ENST00000564407 2204 ntBASIC3.23□□□□□ -1.89
PROM1O43490 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PROM1O43490 RNU4-35P-201ENST00000362588 141 ntBASIC3.23□□□□□ -1.89
PROM1O43490 Y_RNA.106-201ENST00000363189 100 ntBASIC3.23□□□□□ -1.89
PROM1O43490 RNU6-336P-201ENST00000364891 107 ntBASIC3.23□□□□□ -1.89
PROM1O43490 CD24P4-201ENST00000382840 243 ntBASIC3.23□□□□□ -1.89
PROM1O43490 Y_RNA.512-201ENST00000384518 102 ntBASIC3.23□□□□□ -1.89
PROM1O43490 Y_RNA.618-201ENST00000410949 107 ntBASIC3.23□□□□□ -1.89
PROM1O43490 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.23□□□□□ -1.89
PROM1O43490 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
PROM1O43490 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.23□□□□□ -1.89
PROM1O43490 HMGN2P30-201ENST00000423237 256 ntBASIC3.23□□□□□ -1.89
PROM1O43490 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
PROM1O43490 MTND5P27-201ENST00000428871 1720 ntBASIC3.23□□□□□ -1.89
PROM1O43490 RPL21P2-201ENST00000440049 481 ntBASIC3.23□□□□□ -1.89
PROM1O43490 RPL23AP49-201ENST00000492925 468 ntBASIC3.23□□□□□ -1.89
PROM1O43490 RPL22P13-201ENST00000493291 347 ntBASIC3.23□□□□□ -1.89
PROM1O43490 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.23□□□□□ -1.89
PROM1O43490 SNORA40.14-201ENST00000516543 86 ntBASIC3.23□□□□□ -1.89
PROM1O43490 RNU6-1183P-201ENST00000517054 60 ntBASIC3.23□□□□□ -1.89
PROM1O43490 IGKV2-26-201ENST00000518305 343 ntBASIC3.23□□□□□ -1.89
PROM1O43490 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.23□□□□□ -1.89
PROM1O43490 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
PROM1O43490 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.23□□□□□ -1.89
PROM1O43490 AC007458.1-201ENST00000542812 373 ntBASIC3.23□□□□□ -1.89
PROM1O43490 HIGD1AP1-201ENST00000550979 275 ntBASIC3.23□□□□□ -1.89
PROM1O43490 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.23□□□□□ -1.89
PROM1O43490 VN1R107P-201ENST00000601784 209 ntBASIC3.23□□□□□ -1.89
PROM1O43490 FTX_3.1-201ENST00000610451 147 ntBASIC3.23□□□□□ -1.89
PROM1O43490 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.23□□□□□ -1.89
PROM1O43490 U4.7-201ENST00000638126 106 ntBASIC3.23□□□□□ -1.89
PROM1O43490 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PROM1O43490 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PROM1O43490 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PROM1O43490 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PROM1O43490 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
PROM1O43490 Y_RNA.123-201ENST00000363338 102 ntBASIC3.22□□□□□ -1.89
PROM1O43490 RNU6-527P-201ENST00000363425 104 ntBASIC3.22□□□□□ -1.89
PROM1O43490 RNU6-595P-201ENST00000363944 107 ntBASIC3.22□□□□□ -1.89
PROM1O43490 RNU6-898P-201ENST00000365627 104 ntBASIC3.22□□□□□ -1.89
PROM1O43490 RNU6-217P-201ENST00000384164 104 ntBASIC3.22□□□□□ -1.89
PROM1O43490 SNORA51.11-201ENST00000384442 131 ntBASIC3.22□□□□□ -1.89
PROM1O43490 RNU6-1109P-201ENST00000391187 107 ntBASIC3.22□□□□□ -1.89
PROM1O43490 MIR1252-201ENST00000408861 65 ntBASIC3.22□□□□□ -1.89
PROM1O43490 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.22□□□□□ -1.89
PROM1O43490 AC126124.2-201ENST00000413542 321 ntBASIC3.22□□□□□ -1.89
PROM1O43490 AC114482.1-201ENST00000418010 247 ntBASIC3.22□□□□□ -1.89
PROM1O43490 HIGD1AP2-201ENST00000446367 280 ntBASIC3.22□□□□□ -1.89
PROM1O43490 RPL37P4-201ENST00000448908 268 ntBASIC3.22□□□□□ -1.89
PROM1O43490 AC115115.1-201ENST00000449927 248 ntBASIC3.22□□□□□ -1.89
PROM1O43490 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PROM1O43490 AC013470.1-201ENST00000453438 462 ntBASIC3.22□□□□□ -1.89
PROM1O43490 AC010099.1-201ENST00000455434 375 ntBASIC3.22□□□□□ -1.89
PROM1O43490 AC092185.1-201ENST00000491371 97 ntBASIC3.22□□□□□ -1.89
PROM1O43490 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.22□□□□□ -1.89
PROM1O43490 RNU6-1282P-201ENST00000516735 96 ntBASIC3.22□□□□□ -1.89
PROM1O43490 Y_RNA.715-201ENST00000517082 110 ntBASIC3.22□□□□□ -1.89
PROM1O43490 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
PROM1O43490 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
PROM1O43490 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.22□□□□□ -1.89
PROM1O43490 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.22□□□□□ -1.89
PROM1O43490 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.22□□□□□ -1.89
PROM1O43490 CYCSP39-201ENST00000565821 309 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms