Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
SRGAP3O43295 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SRGAP3O43295 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SRGAP3O43295 RNA5SP374-201ENST00000362939 125 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 Y_RNA.123-201ENST00000363338 102 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 Y_RNA.462-201ENST00000384268 102 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 Y_RNA.539-201ENST00000384635 107 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 MIR124-3-201ENST00000384866 87 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 MIR190B-201ENST00000401119 79 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 RNU2-71P-201ENST00000411395 189 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 AC244098.2-201ENST00000422068 99 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.94□□□□□ -1.78
SRGAP3O43295 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.94□□□□□ -1.78
SRGAP3O43295 HIGD1AP2-201ENST00000446367 280 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 RN7SKP210-201ENST00000459176 261 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 AC139453.3-201ENST00000493276 369 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 RN7SKP57-201ENST00000517248 293 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 SNORA81.3-201ENST00000517283 198 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 ATP5F1P5-201ENST00000526403 760 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.94□□□□□ -1.78
SRGAP3O43295 AL645944.1-201ENST00000603857 493 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 AC009779.6-201ENST00000603972 165 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 AL161756.2-201ENST00000604597 246 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 RNA5SP108-201ENST00000605921 117 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.94□□□□□ -1.78
SRGAP3O43295 AC243829.7-201ENST00000633081 225 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 U6.92-201ENST00000636464 89 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.94□□□□□ -1.78
SRGAP3O43295 Z73965.1-201ENST00000623412 2297 ntBASIC3.94□□□□□ -1.78
SRGAP3O43295 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SRGAP3O43295 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SRGAP3O43295 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SRGAP3O43295 AC116096.1-201ENST00000566804 2314 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SRGAP3O43295 Y_RNA.65-201ENST00000362846 100 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 RNU6-280P-201ENST00000364145 104 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 RNU6-335P-201ENST00000364563 113 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 Y_RNA.405-201ENST00000383979 100 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 Y_RNA.439-201ENST00000384119 94 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 Y_RNA.451-201ENST00000384200 100 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 SNORA7.4-201ENST00000384249 137 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 Y_RNA.524-201ENST00000384564 100 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 Y_RNA.561-201ENST00000384694 100 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 SNORA12.2-201ENST00000391040 156 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AL591043.1-201ENST00000432461 424 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 PIGFP3-201ENST00000441918 722 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 RPS4XP22-201ENST00000480755 780 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC087190.1-201ENST00000484462 480 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.93□□□□□ -1.78
SRGAP3O43295 AC107032.1-201ENST00000485945 480 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.93□□□□□ -1.78
SRGAP3O43295 RNU6-377P-201ENST00000515965 102 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 RNU6-572P-201ENST00000516724 80 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 Y_RNA.706-201ENST00000516933 99 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC104027.1-201ENST00000521887 300 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC004024.1-201ENST00000549244 247 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.93□□□□□ -1.78
SRGAP3O43295 AL442163.3-201ENST00000554110 156 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.93□□□□□ -1.78
SRGAP3O43295 AC130289.1-201ENST00000577321 73 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 UBL5P2-201ENST00000583788 219 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC012493.2-201ENST00000595083 291 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 AC090617.7-201ENST00000623952 126 ntBASIC3.93□□□□□ -1.78
SRGAP3O43295 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SRGAP3O43295 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.93□□□□□ -1.78
SRGAP3O43295 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SRGAP3O43295 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.92□□□□□ -1.78
SRGAP3O43295 RNU6-227P-201ENST00000362865 103 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RNU5E-7P-201ENST00000365290 117 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 SNORA40C-201ENST00000391285 128 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RPL21P75-201ENST00000396599 483 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RPL21P28-201ENST00000401418 483 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AL603910.2-201ENST00000407268 136 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 MTCYBP2-201ENST00000407745 171 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.92□□□□□ -1.78
SRGAP3O43295 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.92□□□□□ -1.78
SRGAP3O43295 AL590556.1-201ENST00000423231 483 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AL356867.1-201ENST00000429623 299 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RPL23AP22-201ENST00000437556 453 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.92□□□□□ -1.78
SRGAP3O43295 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SRGAP3O43295 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.92□□□□□ -1.78
SRGAP3O43295 snoU109.2-201ENST00000459316 135 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RPL21P39-201ENST00000463605 483 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 KC877373.1-201ENST00000479066 408 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AC132942.1-201ENST00000486753 483 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AC093591.1-201ENST00000491435 481 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AC006445.1-201ENST00000491925 405 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RPL21P16-201ENST00000495531 483 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RNU1-143P-201ENST00000516296 146 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 SNORA70.24-201ENST00000517233 118 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AC022080.3-201ENST00000544433 482 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 SYF2P1-201ENST00000550658 413 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.92□□□□□ -1.78
SRGAP3O43295 MIR3921-201ENST00000577308 85 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms