Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 MIR4435-1-201ENST00000582552 80 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 BNIP3P25-201ENST00000596023 559 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 APOOP1-201ENST00000604695 592 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 AC087045.1-201ENST00000605856 382 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 RNU6-85P-201ENST00000605989 107 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAFD1O14545 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 AC097372.5-201ENST00000623665 376 ntBASIC2.3□□□□□ -2.04
TRAFD1O14545 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAFD1O14545 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAFD1O14545 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
TRAFD1O14545 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAFD1O14545 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAFD1O14545 CASC19-280ENST00000642102 1351 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAFD1O14545 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 RNU6-1283P-201ENST00000365314 105 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 RNU6-750P-201ENST00000390946 107 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 RNU6-876P-201ENST00000391295 104 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 SNORA3.2-201ENST00000408221 125 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAFD1O14545 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAFD1O14545 SRIP2-201ENST00000428470 166 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AL031274.1-201ENST00000450334 232 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 MRPL42P6-201ENST00000486397 371 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 RPL23AP49-201ENST00000492925 468 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAFD1O14545 AC018710.1-201ENST00000506509 158 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC091885.1-201ENST00000506658 268 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC010486.1-201ENST00000511793 424 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC008413.1-201ENST00000511864 177 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 SNORA25.11-201ENST00000515935 105 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 SNORA19.2-201ENST00000516013 114 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 SNORA14.1-201ENST00000516113 141 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 SCARNA17.1-201ENST00000516211 143 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 SCARNA17.2-201ENST00000516334 143 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 ACA59.2-201ENST00000517061 156 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAFD1O14545 AC025423.5-201ENST00000550230 219 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC091544.4-201ENST00000555268 342 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAFD1O14545 MTCO3P23-201ENST00000561363 289 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC023824.2-201ENST00000566185 400 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAFD1O14545 AC008121.1-201ENST00000603244 268 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC091152.3-201ENST00000604227 325 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 SCARNA17.4-201ENST00000614296 143 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC103705.1-201ENST00000619013 241 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC064859.1-201ENST00000624741 174 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 CDC27P3-201ENST00000635418 1910 ntBASIC2.29□□□□□ -2.04
TRAFD1O14545 AC004944.1-201ENST00000517807 3059 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAFD1O14545 RNU6-942P-201ENST00000363002 107 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 RNU6-19P-201ENST00000384718 107 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.28□□□□□ -2.04
TRAFD1O14545 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAFD1O14545 RBMX2P4-201ENST00000441256 376 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 AC025465.4-201ENST00000513422 638 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 RNU6-358P-201ENST00000516564 75 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.28□□□□□ -2.04
TRAFD1O14545 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAFD1O14545 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAFD1O14545 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAFD1O14545 MIR5692C1-201ENST00000585309 91 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAFD1O14545 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TRAFD1O14545 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAFD1O14545 AC138627.2-201ENST00000624202 601 ntBASIC2.28□□□□□ -2.04
TRAFD1O14545 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAFD1O14545 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAFD1O14545 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAFD1O14545 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TRAFD1O14545 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAFD1O14545 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
TRAFD1O14545 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAFD1O14545 RNU6-1083P-201ENST00000384022 107 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 Y_RNA.480-201ENST00000384364 102 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 SNORD116-20-201ENST00000384529 92 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 MIR147B-201ENST00000390185 80 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 AL356776.1-201ENST00000406574 447 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 RNU6-1140P-201ENST00000410517 106 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 RNU6-373P-201ENST00000411247 98 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 RNA5SP508-201ENST00000411327 119 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAFD1O14545 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAFD1O14545 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.27□□□□□ -2.05
TRAFD1O14545 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAFD1O14545 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAFD1O14545 AC004383.1-201ENST00000438135 289 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 OSTCP8-201ENST00000445117 448 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAFD1O14545 AC007547.1-201ENST00000462177 490 ntBASIC2.27□□□□□ -2.05
TRAFD1O14545 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAFD1O14545 SNORA31.6-201ENST00000516241 130 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms