Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UPK2O00526 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.17□□□□□ -2.22
UPK2O00526 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UPK2O00526 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-500P-201ENST00000362349 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-37P-201ENST00000362692 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-11P-201ENST00000364234 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 SNORD32B-201ENST00000364460 84 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU5E-5P-201ENST00000365379 116 ntBASIC1.17□□□□□ -2.22
UPK2O00526 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-25P-201ENST00000383873 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-1-201ENST00000383898 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 SNORA20.2-201ENST00000383922 131 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-48P-201ENST00000384161 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-36P-201ENST00000384172 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-4P-201ENST00000384205 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-5P-201ENST00000384238 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-3P-201ENST00000384314 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-16P-201ENST00000384385 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-15P-201ENST00000384534 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-1222P-201ENST00000384615 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-2-201ENST00000384627 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-29P-201ENST00000384637 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-9-201ENST00000384776 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-33P-201ENST00000384793 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 SNORA67.6-201ENST00000391093 99 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RPL23AP32-201ENST00000395315 459 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AL357139.1-201ENST00000407792 426 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.17□□□□□ -2.22
UPK2O00526 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK2O00526 AC104850.1-201ENST00000435940 476 ntBASIC1.17□□□□□ -2.22
UPK2O00526 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.17□□□□□ -2.22
UPK2O00526 AL360221.1-201ENST00000445989 335 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RAP1BP2-201ENST00000478270 544 ntBASIC1.17□□□□□ -2.22
UPK2O00526 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.17□□□□□ -2.22
UPK2O00526 AC116562.3-201ENST00000506136 177 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AC104806.1-201ENST00000508720 308 ntBASIC1.17□□□□□ -2.22
UPK2O00526 MTND3P5-201ENST00000512798 333 ntBASIC1.17□□□□□ -2.22
UPK2O00526 Y_RNA.672-201ENST00000516289 104 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AC068587.5-201ENST00000528506 175 ntBASIC1.17□□□□□ -2.22
UPK2O00526 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK2O00526 AC087883.1-201ENST00000551882 391 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AC002400.1-201ENST00000569310 726 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AC110760.3-201ENST00000598794 467 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AC112191.3-201ENST00000604371 277 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-6P-201ENST00000606623 107 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AL451064.1-201ENST00000607718 471 ntBASIC1.17□□□□□ -2.22
UPK2O00526 AP000240.1-201ENST00000609910 452 ntBASIC1.17□□□□□ -2.22
UPK2O00526 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.17□□□□□ -2.22
UPK2O00526 U4.7-201ENST00000638126 106 ntBASIC1.17□□□□□ -2.22
UPK2O00526 RNU6-1285P-201ENST00000363480 105 ntBASIC1.16□□□□□ -2.22
UPK2O00526 RNU6-105P-201ENST00000363909 104 ntBASIC1.16□□□□□ -2.22
UPK2O00526 RNU6-1303P-201ENST00000364841 107 ntBASIC1.16□□□□□ -2.22
UPK2O00526 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK2O00526 AC068050.1-201ENST00000394891 380 ntBASIC1.16□□□□□ -2.22
UPK2O00526 RNU6-607P-201ENST00000411283 108 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK2O00526 CYCSP49-201ENST00000420810 319 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPK2O00526 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.16□□□□□ -2.22
UPK2O00526 AL354695.1-201ENST00000427935 228 ntBASIC1.16□□□□□ -2.22
UPK2O00526 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK2O00526 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK2O00526 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK2O00526 snoU13.15-201ENST00000459407 104 ntBASIC1.16□□□□□ -2.22
UPK2O00526 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK2O00526 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK2O00526 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK2O00526 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK2O00526 SNORA31.24-201ENST00000517232 57 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AP001893.2-201ENST00000526949 202 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AP003461.1-201ENST00000528866 78 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AP003034.1-201ENST00000534621 422 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK2O00526 RPL21P5-201ENST00000554662 472 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AC103987.3-201ENST00000582071 292 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AC008751.2-201ENST00000597885 980 ntBASIC1.16□□□□□ -2.22
UPK2O00526 AC018889.1-201ENST00000605372 397 ntBASIC1.16□□□□□ -2.22
UPK2O00526 Z69720.2-201ENST00000624755 279 ntBASIC1.16□□□□□ -2.22
UPK2O00526 SNORD98-201ENST00000636377 67 ntBASIC1.16□□□□□ -2.22
UPK2O00526 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
UPK2O00526 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UPK2O00526 U8.1-201ENST00000362843 134 ntBASIC1.15□□□□□ -2.23
UPK2O00526 Y_RNA.67-201ENST00000362870 100 ntBASIC1.15□□□□□ -2.23
UPK2O00526 RNU6-112P-201ENST00000363599 104 ntBASIC1.15□□□□□ -2.23
UPK2O00526 RNU6-271P-201ENST00000363858 105 ntBASIC1.15□□□□□ -2.23
UPK2O00526 RNY1P12-201ENST00000364251 105 ntBASIC1.15□□□□□ -2.23
UPK2O00526 RNU6-60P-201ENST00000364792 103 ntBASIC1.15□□□□□ -2.23
UPK2O00526 RNA5SP190-201ENST00000365222 118 ntBASIC1.15□□□□□ -2.23
UPK2O00526 SNORD115-7-201ENST00000365306 82 ntBASIC1.15□□□□□ -2.23
UPK2O00526 RNU6-45P-201ENST00000384471 107 ntBASIC1.15□□□□□ -2.23
UPK2O00526 RNU6-692P-201ENST00000384496 107 ntBASIC1.15□□□□□ -2.23
UPK2O00526 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.15□□□□□ -2.23
UPK2O00526 RPL21P111-201ENST00000418453 477 ntBASIC1.15□□□□□ -2.23
UPK2O00526 AC011233.1-201ENST00000422812 283 ntBASIC1.15□□□□□ -2.23
UPK2O00526 VN1R108P-201ENST00000431580 830 ntBASIC1.15□□□□□ -2.23
UPK2O00526 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.15□□□□□ -2.23
UPK2O00526 AC243964.1-201ENST00000441814 261 ntBASIC1.15□□□□□ -2.23
UPK2O00526 SNRPGP13-201ENST00000442212 177 ntBASIC1.15□□□□□ -2.23
UPK2O00526 AL022238.1-201ENST00000442557 355 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms