Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR514A3-201ENST00000385132 88 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AF274854.1-201ENST00000413236 615 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 SNORD56-201ENST00000413522 71 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MTCO1P21-201ENST00000416634 589 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MTND1P23-201ENST00000416931 372 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 HMGB1P31-201ENST00000437242 427 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AL441985.1-201ENST00000457727 251 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RPL36AP48-201ENST00000485521 314 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR3199-1-201ENST00000582434 88 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR3941-201ENST00000582572 103 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 APOOP1-201ENST00000604695 592 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AC021646.1-201ENST00000605469 484 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 AC012557.2-201ENST00000605919 418 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-6P-201ENST00000606623 107 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR3529-201ENST00000637713 78 ntBASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NEDD8-MDP1E9PL57 HAUS6P2-201ENST00000433254 2404 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 Y_RNA.38-201ENST00000362617 102 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-82P-201ENST00000363970 107 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-1090P-201ENST00000364065 94 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-487P-201ENST00000365430 104 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 Y_RNA.378-201ENST00000365652 113 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 U6atac.2-201ENST00000408644 118 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-1140P-201ENST00000410517 106 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC097463.2-201ENST00000421074 142 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AL121601.2-201ENST00000438019 707 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 MTND1P34-201ENST00000438556 671 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC112771.1-201ENST00000463581 102 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC018437.1-201ENST00000492214 406 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 SNORA25.11-201ENST00000515935 105 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 CENPUP1-201ENST00000526649 1202 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AP000889.2-201ENST00000532684 490 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC136619.2-201ENST00000563361 631 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR3616-201ENST00000584070 92 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 RPS15AP11-201ENST00000594193 385 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC068790.6-201ENST00000602558 258 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AL162413.1-201ENST00000603198 110 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 U2.17-201ENST00000611454 95 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 FER-210ENST00000628534 558 ntTSL 5 BASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 MIR7157-201ENST00000635801 60 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 AC068137.3-201ENST00000639191 341 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 Z75746.1-201ENST00000440243 2080 ntBASIC2.18□□□□□ -2.06
NEDD8-MDP1E9PL57 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC138393.1-203ENST00000327086 343 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU1-72P-201ENST00000362976 153 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 RNY4P14-201ENST00000363656 96 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU4-66P-201ENST00000365199 138 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 OR9R1P-201ENST00000412200 877 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 TOMM20P4-201ENST00000427861 435 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC007969.2-201ENST00000441891 191 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC013470.1-201ENST00000453438 462 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC091885.1-201ENST00000506658 268 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC023141.11-201ENST00000508864 202 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 SNORD60.2-201ENST00000516883 86 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 SNORA31.18-201ENST00000517043 134 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC010186.2-204ENST00000537668 439 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC078814.3-201ENST00000553036 491 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 ZNF519P2-201ENST00000557032 169 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 VN1R80P-201ENST00000597126 338 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 U4.5-201ENST00000617137 123 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC103705.1-201ENST00000619013 241 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC098679.4-201ENST00000624241 654 ntBASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.17□□□□□ -2.06
NEDD8-MDP1E9PL57 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NEDD8-MDP1E9PL57 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.16□□□□□ -2.06
NEDD8-MDP1E9PL57 RNU6-451P-201ENST00000362921 107 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms