Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 SNORA43.2-201ENST00000516652 128 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 KC877982.1-201ENST00000602313 470 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AL590229.1-201ENST00000603497 542 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC080078.3-201ENST00000605407 463 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AL359821.1-201ENST00000605519 182 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 U6.42-201ENST00000618440 107 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 OR4G3P-201ENST00000633500 913 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 RNU6-462P-201ENST00000362659 105 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-560P-201ENST00000364007 108 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-53P-201ENST00000365367 106 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 MIR532-201ENST00000385025 91 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AC092809.3-201ENST00000415453 231 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AL122001.1-201ENST00000457027 370 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 HMGN2P9-201ENST00000476875 229 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AC112198.4-201ENST00000515450 351 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 MIR449C-201ENST00000516047 92 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 RNU5F-2P-201ENST00000516066 82 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 RNA5SP503-201ENST00000517047 117 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 LRRC6P1-201ENST00000532188 885 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 BNIP3P6-201ENST00000549284 499 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AC013244.2-201ENST00000603396 103 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AL365434.2-201ENST00000607979 234 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 AL354696.1-201ENST00000614652 497 ntBASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-1019P-201ENST00000364424 107 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 SNORD32B-201ENST00000364460 84 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 RPS3AP36-201ENST00000398190 775 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 Y_RNA.595-201ENST00000410403 105 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 RNU2-62P-201ENST00000410868 191 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AC245047.4-201ENST00000433189 144 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 RPL31P3-201ENST00000458430 332 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 MTCO3P27-201ENST00000514397 196 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 Y_RNA.687-201ENST00000516558 91 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 MIR3664-201ENST00000579074 99 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 MTATP6P2-201ENST00000603319 678 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 MIR6857-201ENST00000613267 93 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AL138955.1-201ENST00000622881 1040 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 AL359757.2-201ENST00000624309 274 ntBASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV4A0A0B4J268 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 MIR194-1-201ENST00000384892 85 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 MIR222-201ENST00000384992 110 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 RAP1BP3-201ENST00000407180 549 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 RNU4-22P-201ENST00000411058 166 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 MTCO3P41-201ENST00000414801 328 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 PIGFP2-201ENST00000421400 651 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 MTND1P30-201ENST00000441241 901 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 snoU13.30-201ENST00000458951 104 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 Y_RNA.689-201ENST00000516589 107 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 MTND3P13-201ENST00000574391 343 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 AL596327.1-201ENST00000603629 213 ntBASIC0.63□□□□□ -2.31
TRAV4A0A0B4J268 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 SNORA63D-201ENST00000364359 132 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-438P-201ENST00000365561 103 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-946P-201ENST00000383878 107 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-1080P-201ENST00000383982 107 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-1176P-201ENST00000390955 107 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 RN7SKP61-201ENST00000410642 295 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AC099677.2-201ENST00000436385 175 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 SNRPEP8-201ENST00000442866 260 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 snoU13.27-201ENST00000459278 104 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AC108729.3-201ENST00000513484 108 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AC115990.1-201ENST00000526957 301 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 MIR4498-201ENST00000577599 66 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AC008507.2-201ENST00000588402 1176 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 AC018889.1-201ENST00000605372 397 ntBASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms