Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC007283.2-201ENST00000424739 197 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC007969.2-201ENST00000441891 191 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AL122001.1-201ENST00000457027 370 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 RPL31P58-201ENST00000469001 379 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AP000797.1-201ENST00000478870 387 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC108078.2-201ENST00000510750 236 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC011979.2-201ENST00000527568 352 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AP003181.2-201ENST00000528941 181 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 SUB1P4-201ENST00000566062 339 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AL031667.3-201ENST00000620124 655 ntBASIC0.95□□□□□ -2.26
TRAV41A0A0B4J266 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC233981.2-201ENST00000611524 1614 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AL391994.1-201ENST00000254724 282 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-78P-201ENST00000362897 107 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 Y_RNA.327-201ENST00000365201 102 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC006366.1-201ENST00000422002 759 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 Z82205.1-201ENST00000428456 297 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AL365400.1-201ENST00000431854 640 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC015922.2-201ENST00000435593 184 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 RPL22P17-201ENST00000438729 315 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 Y_RNA.638-201ENST00000459374 113 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 RBBP4P6-201ENST00000508098 202 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 MIR449C-201ENST00000516047 92 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 MTND2P7-201ENST00000521337 640 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC002400.1-201ENST00000569310 726 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC005668.1-201ENST00000571142 476 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC091135.1-201ENST00000585943 307 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC022022.2-201ENST00000602989 360 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC018714.1-201ENST00000605028 208 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC016727.1-205ENST00000605437 569 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AL359821.1-201ENST00000605519 182 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 AC104073.3-201ENST00000610942 955 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 U6.42-201ENST00000618440 107 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-371P-201ENST00000364283 108 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-1200P-201ENST00000384162 107 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 SNORA24.1-201ENST00000384401 135 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 SNORA12-201ENST00000391162 147 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 MTCYBP36-201ENST00000404146 440 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 RPS27AP14-201ENST00000422868 454 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC000111.3-201ENST00000433478 193 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 RPL37P21-201ENST00000435890 276 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 MTND5P2-201ENST00000442927 1142 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 RPL39P29-201ENST00000447779 157 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC130509.1-201ENST00000464158 433 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC087477.1-201ENST00000465747 340 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 ADI1P3-201ENST00000549509 470 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AL136363.2-201ENST00000604173 851 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC105148.1-201ENST00000604961 409 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AL121890.5-201ENST00000620848 304 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC007792.1-201ENST00000623023 402 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC097372.5-201ENST00000623665 376 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AL157786.1-207ENST00000627771 695 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC006927.4-201ENST00000639187 543 ntBASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV41A0A0B4J266 AC073343.1-201ENST00000328239 651 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 MIR340-201ENST00000362125 95 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 Y_RNA.22-201ENST00000362492 102 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-271P-201ENST00000363858 105 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-160P-201ENST00000384591 107 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 MIR618-201ENST00000385287 98 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 SNORD115.1-201ENST00000391109 76 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 MTCO2P23-201ENST00000425216 680 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 CBX3P6-201ENST00000430257 527 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 RPS26P55-201ENST00000471178 356 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 UBE2V1P12-201ENST00000503954 474 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC010587.1-201ENST00000505809 469 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 RNU5F-2P-201ENST00000516066 82 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 RN7SKP179-201ENST00000516126 217 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC090821.2-201ENST00000523552 176 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC137800.2-201ENST00000574375 120 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC008521.1-201ENST00000587471 187 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms