Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 Y_RNA.46-201ENST00000362695 102 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 Y_RNA.110-201ENST00000363220 99 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-1179P-201ENST00000384667 107 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 MIR578-201ENST00000384828 96 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 MIR1289-2-201ENST00000408360 111 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 SNX2P2-201ENST00000424553 323 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 SNORA59A-201ENST00000459326 152 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC145146.1-201ENST00000496370 254 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AL163195.1-201ENST00000496941 348 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 ATP5EP1-201ENST00000510257 156 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC010587.2-201ENST00000511727 448 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 RN7SKP88-201ENST00000516847 250 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 SNORD60.2-201ENST00000516883 86 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 DNAJC19P9-201ENST00000555084 351 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AL022345.2-201ENST00000606307 135 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC144521.1-201ENST00000607148 956 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AC104073.3-201ENST00000610942 955 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 7SK.8-201ENST00000612110 250 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 7SK.11-201ENST00000615477 250 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 AL359547.2-201ENST00000615810 418 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 7SK.13-201ENST00000622040 250 ntBASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
TRAV9-1A0A075B6T8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-862P-201ENST00000362804 105 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-78P-201ENST00000362897 107 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-1285P-201ENST00000363480 105 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 SNORA7.1-201ENST00000363750 139 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-331P-201ENST00000384724 107 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 SNORA12.2-201ENST00000391040 156 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU4-22P-201ENST00000411058 166 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 MTCO3P41-201ENST00000414801 328 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 PRPS1P1-201ENST00000445305 876 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 AC079140.3-201ENST00000511111 550 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 MTCO3P28-201ENST00000513351 515 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU2-10P-201ENST00000516375 211 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 AC123904.2-201ENST00000548059 300 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 MTND4LP25-201ENST00000570218 163 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 MIR3976-201ENST00000606807 139 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 AL451064.1-201ENST00000607718 471 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 AC092106.3-201ENST00000611308 722 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 AC084824.5-201ENST00000612009 413 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-1019P-201ENST00000364424 107 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-1222P-201ENST00000384615 107 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 MIR544A-201ENST00000384855 91 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-1176P-201ENST00000390955 107 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AL356776.1-201ENST00000406574 447 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AC013410.2-201ENST00000422627 201 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 OOSP1P1-201ENST00000423265 274 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 RPL23AP94-201ENST00000512518 302 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 CYCSP23-201ENST00000519781 313 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 MIR3664-201ENST00000579074 99 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 MIR4303-201ENST00000581299 66 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AL606834.3-201ENST00000602615 496 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AC025811.1-201ENST00000604312 472 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AL034555.1-201ENST00000604816 211 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AC083806.3-201ENST00000614016 455 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 AL353770.2-201ENST00000620024 78 ntBASIC0.68□□□□□ -2.3
TRAV9-1A0A075B6T8 SNORA4.1-201ENST00000364263 144 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 RNY4P16-201ENST00000364768 94 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 SNORD116.1-201ENST00000365628 92 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 Y_RNA.465-201ENST00000384293 102 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 AL360271.2-201ENST00000447710 161 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 ATP5J2P3-201ENST00000451550 258 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 snoU13.27-201ENST00000459278 104 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU1-86P-201ENST00000516108 154 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
TRAV9-1A0A075B6T8 RNU1-107P-201ENST00000516617 154 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms