Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 MIR148B-201ENST00000362252 99 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 Y_RNA.67-201ENST00000362870 100 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 Y_RNA.387-201ENST00000383918 102 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 Y_RNA.482-201ENST00000384377 111 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AL078595.1-201ENST00000404458 226 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AL513475.1-201ENST00000406602 315 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AL139132.1-201ENST00000431587 344 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC004383.1-201ENST00000438135 289 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AP001324.2-201ENST00000461163 319 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 RPS29P2-201ENST00000479278 136 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC114801.2-201ENST00000503825 781 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC116337.1-201ENST00000509680 687 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 SNORA31.23-201ENST00000517219 133 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 POLR3GP2-201ENST00000588366 668 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 BNIP3P16-201ENST00000589779 534 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 MIR3976-201ENST00000606807 139 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AL359697.1-201ENST00000624879 587 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC241585.2-209ENST00000638217 143 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 AC008264.2-201ENST00000610193 3731 ntBASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN16Q9Y5I7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 RNU1-109P-201ENST00000383960 147 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 Y_RNA.474-201ENST00000384341 102 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 MIR544A-201ENST00000384855 91 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 MIR483-201ENST00000385070 76 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 RPS29P13-201ENST00000402041 169 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC245054.2-201ENST00000415639 319 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 ACA59.1-201ENST00000515966 143 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 RNU6-277P-201ENST00000516272 106 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 RNU5B-3P-201ENST00000516601 115 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 RNU6-1016P-201ENST00000516689 94 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 GLYCAM1-201ENST00000546596 285 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC093027.1-201ENST00000546698 429 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC105137.2-201ENST00000569073 466 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 MIR3616-201ENST00000584070 92 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC011471.1-201ENST00000585766 187 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AL117336.2-201ENST00000602435 335 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC018889.1-201ENST00000605372 397 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC005046.1-201ENST00000608515 625 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC096772.1-201ENST00000609146 564 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AL162274.2-201ENST00000614406 332 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 PISRT1.1-201ENST00000616930 107 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 AL359757.2-201ENST00000624309 274 ntBASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CLDN16Q9Y5I7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
CLDN16Q9Y5I7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 HAUS6P2-201ENST00000433254 2404 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 Y_RNA.58-201ENST00000362807 102 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 Y_RNA.154-201ENST00000363624 102 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RNY3P1-201ENST00000365085 102 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RNY3-201ENST00000365484 102 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 Y_RNA.490-201ENST00000384413 102 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RNU6-692P-201ENST00000384496 107 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RNU4-14P-201ENST00000410858 122 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RNU6-370P-201ENST00000411008 104 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RNU6-1304P-201ENST00000411374 106 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 Z98742.2-201ENST00000431564 187 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RPS15AP7-201ENST00000439294 405 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AC243964.1-201ENST00000441814 261 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RPL30P12-201ENST00000474666 353 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RPL36AP48-201ENST00000485521 314 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AIG1P1-201ENST00000503376 148 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AC245166.1-201ENST00000521012 253 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AP005902.1-201ENST00000521358 186 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 IMMP1LP2-201ENST00000552954 492 ntBASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN16Q9Y5I7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms