Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC005562.2-201ENST00000618264 111 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 AC010733.2-201ENST00000589496 5702 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-1290P-201ENST00000362957 109 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-103P-201ENST00000363686 107 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 U3.9-201ENST00000363823 204 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-151P-201ENST00000364158 107 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RNA5SP151-201ENST00000365632 117 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR93-201ENST00000385024 80 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RNA5SP39-201ENST00000411245 120 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 CR769767.1-201ENST00000436337 346 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RPL31P41-201ENST00000477967 372 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RPL32P34-201ENST00000486380 400 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RN7SKP164-201ENST00000516138 266 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 AC100767.1-201ENST00000528178 123 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 HSPE1P7-201ENST00000604681 321 ntBASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA11Q9Y5H2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 MFSD8-242ENST00000641690 4199 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC021146.4-201ENST00000309229 279 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 Y_RNA.287-201ENST00000364853 94 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR186-201ENST00000384988 86 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 RNA5SP397-201ENST00000391323 118 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 RN7SKP216-201ENST00000411050 312 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AL162591.2-201ENST00000449634 317 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 U8.19-201ENST00000459095 133 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 snoU13.14-201ENST00000459372 104 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 RPL30P14-201ENST00000482744 348 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 SNORD116-25-201ENST00000516517 92 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC069240.1-201ENST00000548774 375 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC002076.2-201ENST00000617362 122 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC068205.3-201ENST00000636385 468 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 CPHL1P-201ENST00000461341 3407 ntBASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA11Q9Y5H2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-529P-201ENST00000363383 104 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-454P-201ENST00000364292 107 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU1-63P-201ENST00000383902 164 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR147B-201ENST00000390185 80 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 Y_RNA.586-201ENST00000391146 98 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-381P-201ENST00000391259 108 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AL133475.1-201ENST00000404414 305 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RNA5SP201-201ENST00000410316 124 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RNA5SP104-201ENST00000410989 118 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AL590762.4-201ENST00000425885 253 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RPS12P10-201ENST00000427031 377 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AC027124.2-201ENST00000428249 105 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AC004386.2-201ENST00000441858 148 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AC012671.1-201ENST00000451912 203 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AP002884.2-201ENST00000471647 395 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 RN7SL826P-201ENST00000479724 288 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR4744-201ENST00000581563 82 ntBASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGA11Q9Y5H2 FAM25E-202ENST00000608562 189 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms