Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AL356157.2-201ENST00000605122 111 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AL365361.1-201ENST00000566942 3481 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 MTND5P9-201ENST00000503854 1755 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-463P-201ENST00000384340 107 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AL356968.1-201ENST00000416622 474 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AC018865.2-201ENST00000423631 129 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 BX276092.3-201ENST00000424182 230 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 MTND3P9-201ENST00000429526 346 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AL441985.1-201ENST00000457727 251 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 RPS29P27-201ENST00000463711 170 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 IGKV2-26-201ENST00000518305 343 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 COX6CP5-201ENST00000527162 228 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AC019159.1-201ENST00000605094 187 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 7SK.10-201ENST00000621414 298 ntBASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB1Q9Y5F3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 SNORD56.1-201ENST00000362913 68 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.252-201ENST00000364556 101 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 SNORA14A-201ENST00000364773 135 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-784P-201ENST00000384330 106 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 RNY1P14-201ENST00000384426 108 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-843P-201ENST00000384454 104 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.527-201ENST00000384573 102 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-19P-201ENST00000384718 107 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 UBA52P6-201ENST00000399822 382 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 GSTA11P-201ENST00000452866 669 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 UBE2DNL-203ENST00000474922 222 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 RPL17P19-201ENST00000489069 552 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 SNORD59.2-201ENST00000516873 68 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-699P-201ENST00000517081 110 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 EIF4BP1-201ENST00000554881 351 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 SUB1P3-201ENST00000564581 315 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AC025281.1-201ENST00000567026 265 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 MIR4503-201ENST00000582187 83 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 MIR4325-201ENST00000583049 90 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AC083806.3-201ENST00000614016 455 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AL132822.1-201ENST00000617063 513 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 AC241585.2-209ENST00000638217 143 ntBASIC3.35□□□□□ -1.87
PCDHB1Q9Y5F3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 RNU1-75P-201ENST00000347264 129 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 RNU1-105P-201ENST00000363470 161 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 U3.6-201ENST00000363622 211 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-487P-201ENST00000365430 104 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC117470.1-201ENST00000381974 330 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.428-201ENST00000384078 102 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-505P-201ENST00000384427 107 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 MRPL42P3-201ENST00000401492 326 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 RNA5SP390-201ENST00000410191 113 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AL365496.1-201ENST00000426885 215 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC099799.1-201ENST00000439809 192 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC243964.1-201ENST00000441814 261 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC022447.4-201ENST00000504053 364 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 MIR5696-201ENST00000578474 85 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC091152.3-201ENST00000604227 325 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC006157.1-201ENST00000611750 366 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms