Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU6-37P-201ENST00000362692 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-655P-201ENST00000362858 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-11P-201ENST00000364234 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-1-201ENST00000383898 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-42P-201ENST00000384165 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-36P-201ENST00000384172 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-4P-201ENST00000384205 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-5P-201ENST00000384238 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-3P-201ENST00000384314 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-2-201ENST00000384627 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-9-201ENST00000384776 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-33P-201ENST00000384793 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 CBX3P9-201ENST00000402326 552 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 MTATP6P27-201ENST00000416987 621 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 MTND2P21-201ENST00000436242 1042 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 NEFMP1-201ENST00000443423 1006 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AL031313.1-201ENST00000448435 256 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AC091435.1-201ENST00000505442 584 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AC098483.2-201ENST00000603158 454 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 RNU6-6P-201ENST00000606623 107 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 AC096586.1-201ENST00000610267 561 ntBASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.07□□□□□ -2.42
AP4S1Q9Y587 Y_RNA.40-201ENST00000362645 93 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 MIR29B2-201ENST00000385055 81 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 AC011233.1-201ENST00000422812 283 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 AC073614.1-201ENST00000438690 650 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 MTND1P3-201ENST00000484956 952 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 AC079140.3-201ENST00000511111 550 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 RNA5SP135-201ENST00000517019 125 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 RNU6-87P-201ENST00000607561 108 ntBASIC-0.08□□□□□ -2.42
AP4S1Q9Y587 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 MIR340-201ENST00000362125 95 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 RNY1P8-201ENST00000383970 114 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 SNORA80D-201ENST00000384488 135 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 RNU2-70P-201ENST00000410718 179 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 RPS3AP37-201ENST00000419176 745 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 BRK1P2-201ENST00000442875 223 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AC020550.1-201ENST00000447385 163 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AL353752.1-201ENST00000454946 260 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 RNA5SP220-201ENST00000516298 104 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 BNIP3P6-201ENST00000549284 499 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AL360219.1-201ENST00000610230 366 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.09□□□□□ -2.42
AP4S1Q9Y587 AC107982.1-201ENST00000507171 1300 ntBASIC-0.1□□□□□ -2.42
AP4S1Q9Y587 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 MIR103A1-201ENST00000362165 78 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 RNA5SP264-201ENST00000363115 107 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 RNU6-950P-201ENST00000384651 107 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 MIR499A-201ENST00000384903 122 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 RAP1BP3-201ENST00000407180 549 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 MTCO3P1-205ENST00000422088 832 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AL606662.1-201ENST00000445763 553 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC104982.1-201ENST00000478775 574 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC013828.1-201ENST00000481845 158 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 CYCTP-201ENST00000504253 315 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 SNORD60.2-201ENST00000516883 86 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AL136520.1-202ENST00000555494 763 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC126365.2-201ENST00000580630 379 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC078795.2-201ENST00000602835 1252 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AP002906.1-201ENST00000603405 233 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC112191.3-201ENST00000604371 277 ntBASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.1□□□□□ -2.43
AP4S1Q9Y587 SNORD114-23-201ENST00000363536 72 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 RNU1-96P-201ENST00000364163 162 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 RNU6-512P-201ENST00000364438 103 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 RNU6-342P-201ENST00000384521 104 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 RNU1-139P-201ENST00000391307 165 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms